Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 RPL30-202ENST00000396070 440 ntTSL 2 BASIC14.9□□□□□ -0.02
NUP43Q8NFH3 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NUP43Q8NFH3 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC14.9□□□□□ -0.02
NUP43Q8NFH3 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC14.9□□□□□ -0.02
NUP43Q8NFH3 EEF1DP4-201ENST00000446006 880 ntBASIC14.9□□□□□ -0.02
NUP43Q8NFH3 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC14.9□□□□□ -0.02
NUP43Q8NFH3 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
NUP43Q8NFH3 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NUP43Q8NFH3 MIR4313-201ENST00000580760 101 ntBASIC14.9□□□□□ -0.02
NUP43Q8NFH3 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC14.9□□□□□ -0.02
NUP43Q8NFH3 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC14.9□□□□□ -0.02
NUP43Q8NFH3 METTL23-205ENST00000588302 925 ntTSL 5 BASIC14.9□□□□□ -0.02
NUP43Q8NFH3 GPALPP1-207ENST00000611650 899 ntBASIC14.9□□□□□ -0.02
NUP43Q8NFH3 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
NUP43Q8NFH3 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
NUP43Q8NFH3 AC134684.3-201ENST00000641758 218 ntBASIC14.9□□□□□ -0.02
NUP43Q8NFH3 FES-204ENST00000414248 2327 ntTSL 2 BASIC14.9□□□□□ -0.02
NUP43Q8NFH3 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NUP43Q8NFH3 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NUP43Q8NFH3 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NUP43Q8NFH3 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC14.9□□□□□ -0.02
NUP43Q8NFH3 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
NUP43Q8NFH3 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NUP43Q8NFH3 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
NUP43Q8NFH3 LCK-206ENST00000373564 2137 ntTSL 5 BASIC14.9□□□□□ -0.02
NUP43Q8NFH3 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC14.9□□□□□ -0.02
NUP43Q8NFH3 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC14.9□□□□□ -0.02
NUP43Q8NFH3 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
NUP43Q8NFH3 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
NUP43Q8NFH3 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
NUP43Q8NFH3 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
NUP43Q8NFH3 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NUP43Q8NFH3 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC14.9□□□□□ -0.02
NUP43Q8NFH3 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
NUP43Q8NFH3 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
NUP43Q8NFH3 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC14.9□□□□□ -0.02
NUP43Q8NFH3 MYB-242ENST00000618728 3545 ntTSL 5 BASIC14.89□□□□□ -0.03
NUP43Q8NFH3 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
NUP43Q8NFH3 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
NUP43Q8NFH3 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
NUP43Q8NFH3 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NUP43Q8NFH3 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
NUP43Q8NFH3 ILF3-AS1-201ENST00000591501 1983 ntBASIC14.89□□□□□ -0.03
NUP43Q8NFH3 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NUP43Q8NFH3 AC073347.1-201ENST00000421633 2643 ntBASIC14.89□□□□□ -0.03
NUP43Q8NFH3 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NUP43Q8NFH3 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
NUP43Q8NFH3 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
NUP43Q8NFH3 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
NUP43Q8NFH3 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC14.89□□□□□ -0.03
NUP43Q8NFH3 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC14.89□□□□□ -0.03
NUP43Q8NFH3 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
NUP43Q8NFH3 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NUP43Q8NFH3 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NUP43Q8NFH3 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
NUP43Q8NFH3 RBM39-205ENST00000397370 612 ntTSL 2 BASIC14.89□□□□□ -0.03
NUP43Q8NFH3 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
NUP43Q8NFH3 KRT18P13-201ENST00000400056 1290 ntBASIC14.89□□□□□ -0.03
NUP43Q8NFH3 RAC2-202ENST00000401529 569 ntTSL 4 BASIC14.89□□□□□ -0.03
NUP43Q8NFH3 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NUP43Q8NFH3 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
NUP43Q8NFH3 AP006288.1-201ENST00000446065 395 ntBASIC14.89□□□□□ -0.03
NUP43Q8NFH3 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC14.89□□□□□ -0.03
NUP43Q8NFH3 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC14.89□□□□□ -0.03
NUP43Q8NFH3 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC14.89□□□□□ -0.03
NUP43Q8NFH3 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC14.89□□□□□ -0.03
NUP43Q8NFH3 BANF1P1-201ENST00000553684 263 ntBASIC14.89□□□□□ -0.03
NUP43Q8NFH3 SNHG9-202ENST00000564014 471 ntBASIC14.89□□□□□ -0.03
NUP43Q8NFH3 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC14.89□□□□□ -0.03
NUP43Q8NFH3 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
NUP43Q8NFH3 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC14.89□□□□□ -0.03
NUP43Q8NFH3 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
NUP43Q8NFH3 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NUP43Q8NFH3 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
NUP43Q8NFH3 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC14.89□□□□□ -0.03
NUP43Q8NFH3 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
NUP43Q8NFH3 TKT-202ENST00000423516 2075 ntTSL 2 BASIC14.89□□□□□ -0.03
NUP43Q8NFH3 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NUP43Q8NFH3 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
NUP43Q8NFH3 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
NUP43Q8NFH3 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
NUP43Q8NFH3 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
NUP43Q8NFH3 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC14.89□□□□□ -0.03
NUP43Q8NFH3 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NUP43Q8NFH3 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
NUP43Q8NFH3 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC14.89□□□□□ -0.03
NUP43Q8NFH3 AC022532.1-201ENST00000624563 1728 ntBASIC14.89□□□□□ -0.03
NUP43Q8NFH3 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC14.89□□□□□ -0.03
NUP43Q8NFH3 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC14.89□□□□□ -0.03
NUP43Q8NFH3 SSR4P1-203ENST00000599569 2260 ntBASIC14.89□□□□□ -0.03
NUP43Q8NFH3 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
NUP43Q8NFH3 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC14.89□□□□□ -0.03
NUP43Q8NFH3 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC14.89□□□□□ -0.03
NUP43Q8NFH3 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
NUP43Q8NFH3 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
NUP43Q8NFH3 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NUP43Q8NFH3 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
NUP43Q8NFH3 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
NUP43Q8NFH3 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC14.88□□□□□ -0.03
NUP43Q8NFH3 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms