Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC19.42■□□□□ 0.7
RTL9Q8NET4 AC093813.1-201ENST00000605066 256 ntBASIC19.42■□□□□ 0.7
RTL9Q8NET4 GPR182-203ENST00000622922 591 ntBASIC19.42■□□□□ 0.7
RTL9Q8NET4 PFAS-212ENST00000625942 396 ntTSL 5 BASIC19.42■□□□□ 0.7
RTL9Q8NET4 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RTL9Q8NET4 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RTL9Q8NET4 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RTL9Q8NET4 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RTL9Q8NET4 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RTL9Q8NET4 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC19.41■□□□□ 0.7
RTL9Q8NET4 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC19.41■□□□□ 0.7
RTL9Q8NET4 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RTL9Q8NET4 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RTL9Q8NET4 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
RTL9Q8NET4 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC19.41■□□□□ 0.7
RTL9Q8NET4 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC19.41■□□□□ 0.7
RTL9Q8NET4 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
RTL9Q8NET4 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RTL9Q8NET4 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
RTL9Q8NET4 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC19.41■□□□□ 0.7
RTL9Q8NET4 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
RTL9Q8NET4 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RTL9Q8NET4 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RTL9Q8NET4 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC19.41■□□□□ 0.7
RTL9Q8NET4 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RTL9Q8NET4 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC19.41■□□□□ 0.7
RTL9Q8NET4 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RTL9Q8NET4 AC092933.1-201ENST00000393644 945 ntBASIC19.41■□□□□ 0.7
RTL9Q8NET4 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RTL9Q8NET4 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC19.41■□□□□ 0.7
RTL9Q8NET4 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC19.41■□□□□ 0.7
RTL9Q8NET4 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
RTL9Q8NET4 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
RTL9Q8NET4 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC19.41■□□□□ 0.7
RTL9Q8NET4 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC19.41■□□□□ 0.7
RTL9Q8NET4 METTL26-214ENST00000614890 801 ntTSL 3 BASIC19.41■□□□□ 0.7
RTL9Q8NET4 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RTL9Q8NET4 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
RTL9Q8NET4 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RTL9Q8NET4 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC19.41■□□□□ 0.7
RTL9Q8NET4 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RTL9Q8NET4 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC19.4■□□□□ 0.7
RTL9Q8NET4 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC19.4■□□□□ 0.7
RTL9Q8NET4 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC19.4■□□□□ 0.7
RTL9Q8NET4 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC19.4■□□□□ 0.7
RTL9Q8NET4 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RTL9Q8NET4 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
RTL9Q8NET4 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RTL9Q8NET4 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RTL9Q8NET4 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC19.4■□□□□ 0.7
RTL9Q8NET4 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RTL9Q8NET4 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RTL9Q8NET4 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RTL9Q8NET4 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RTL9Q8NET4 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
RTL9Q8NET4 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
RTL9Q8NET4 SUN1-204ENST00000403868 978 ntTSL 2 BASIC19.4■□□□□ 0.7
RTL9Q8NET4 BAATP1-201ENST00000412284 1225 ntBASIC19.4■□□□□ 0.7
RTL9Q8NET4 RPL28-203ENST00000428193 573 ntTSL 2 BASIC19.4■□□□□ 0.7
RTL9Q8NET4 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC19.4■□□□□ 0.7
RTL9Q8NET4 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
RTL9Q8NET4 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RTL9Q8NET4 AC022137.2-201ENST00000503482 481 ntBASIC19.4■□□□□ 0.7
RTL9Q8NET4 AP000812.2-201ENST00000538934 718 ntBASIC19.4■□□□□ 0.7
RTL9Q8NET4 RPL28-207ENST00000558815 616 ntTSL 2 BASIC19.4■□□□□ 0.7
RTL9Q8NET4 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC19.4■□□□□ 0.7
RTL9Q8NET4 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
RTL9Q8NET4 ATF5-205ENST00000600336 682 ntTSL 2 BASIC19.4■□□□□ 0.7
RTL9Q8NET4 MIR6787-201ENST00000616675 61 ntBASIC19.4■□□□□ 0.7
RTL9Q8NET4 MIR6869-201ENST00000619434 62 ntBASIC19.4■□□□□ 0.7
RTL9Q8NET4 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RTL9Q8NET4 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
RTL9Q8NET4 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
RTL9Q8NET4 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC19.4■□□□□ 0.7
RTL9Q8NET4 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RTL9Q8NET4 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RTL9Q8NET4 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
RTL9Q8NET4 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC19.39■□□□□ 0.7
RTL9Q8NET4 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC19.39■□□□□ 0.7
RTL9Q8NET4 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC19.39■□□□□ 0.7
RTL9Q8NET4 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.7
RTL9Q8NET4 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
RTL9Q8NET4 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.7
RTL9Q8NET4 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC19.39■□□□□ 0.69
RTL9Q8NET4 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC19.39■□□□□ 0.69
RTL9Q8NET4 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RTL9Q8NET4 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
RTL9Q8NET4 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RTL9Q8NET4 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
RTL9Q8NET4 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RTL9Q8NET4 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RTL9Q8NET4 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RTL9Q8NET4 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RTL9Q8NET4 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC19.39■□□□□ 0.69
RTL9Q8NET4 USB1-202ENST00000423271 1217 ntTSL 2 BASIC19.39■□□□□ 0.69
RTL9Q8NET4 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RTL9Q8NET4 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC19.39■□□□□ 0.69
RTL9Q8NET4 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RTL9Q8NET4 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
RTL9Q8NET4 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms