Protein–RNA interactions for Protein: Q8N616

LINC00311, Putative uncharacterized protein encoded by LINC00311, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00311Q8N616 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LINC00311Q8N616 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LINC00311Q8N616 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC12.85□□□□□ -0.35
LINC00311Q8N616 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC12.85□□□□□ -0.35
LINC00311Q8N616 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
LINC00311Q8N616 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LINC00311Q8N616 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
LINC00311Q8N616 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC12.85□□□□□ -0.35
LINC00311Q8N616 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
LINC00311Q8N616 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC12.85□□□□□ -0.35
LINC00311Q8N616 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
LINC00311Q8N616 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LINC00311Q8N616 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
LINC00311Q8N616 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC12.85□□□□□ -0.35
LINC00311Q8N616 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
LINC00311Q8N616 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC12.85□□□□□ -0.35
LINC00311Q8N616 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC12.85□□□□□ -0.35
LINC00311Q8N616 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
LINC00311Q8N616 CENPM-205ENST00000404067 905 ntTSL 3 BASIC12.85□□□□□ -0.35
LINC00311Q8N616 CENPM-206ENST00000407253 818 ntTSL 2 BASIC12.85□□□□□ -0.35
LINC00311Q8N616 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC12.85□□□□□ -0.35
LINC00311Q8N616 PON3-203ENST00000427422 894 ntTSL 3 BASIC12.85□□□□□ -0.35
LINC00311Q8N616 USP40-206ENST00000443711 628 ntTSL 2 BASIC12.85□□□□□ -0.35
LINC00311Q8N616 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LINC00311Q8N616 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC12.85□□□□□ -0.35
LINC00311Q8N616 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC12.85□□□□□ -0.35
LINC00311Q8N616 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC12.85□□□□□ -0.35
LINC00311Q8N616 RPL28-205ENST00000558131 444 ntTSL 5 BASIC12.85□□□□□ -0.35
LINC00311Q8N616 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC12.85□□□□□ -0.35
LINC00311Q8N616 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC12.85□□□□□ -0.35
LINC00311Q8N616 AC093028.1-201ENST00000622998 982 ntBASIC12.85□□□□□ -0.35
LINC00311Q8N616 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC12.85□□□□□ -0.35
LINC00311Q8N616 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
LINC00311Q8N616 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
LINC00311Q8N616 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LINC00311Q8N616 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LINC00311Q8N616 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
LINC00311Q8N616 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
LINC00311Q8N616 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LINC00311Q8N616 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
LINC00311Q8N616 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LINC00311Q8N616 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
LINC00311Q8N616 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
LINC00311Q8N616 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC12.85□□□□□ -0.35
LINC00311Q8N616 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
LINC00311Q8N616 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
LINC00311Q8N616 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC12.85□□□□□ -0.35
LINC00311Q8N616 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
LINC00311Q8N616 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LINC00311Q8N616 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
LINC00311Q8N616 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
LINC00311Q8N616 AP003680.1-201ENST00000598970 3660 ntBASIC12.84□□□□□ -0.35
LINC00311Q8N616 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
LINC00311Q8N616 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LINC00311Q8N616 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
LINC00311Q8N616 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LINC00311Q8N616 AC092384.3-202ENST00000564646 2873 ntBASIC12.84□□□□□ -0.35
LINC00311Q8N616 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC12.84□□□□□ -0.35
LINC00311Q8N616 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LINC00311Q8N616 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
LINC00311Q8N616 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC12.84□□□□□ -0.35
LINC00311Q8N616 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LINC00311Q8N616 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
LINC00311Q8N616 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
LINC00311Q8N616 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LINC00311Q8N616 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LINC00311Q8N616 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
LINC00311Q8N616 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
LINC00311Q8N616 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LINC00311Q8N616 LBH-203ENST00000404397 543 ntTSL 4 BASIC12.84□□□□□ -0.35
LINC00311Q8N616 RPL5P21-201ENST00000404620 815 ntBASIC12.84□□□□□ -0.35
LINC00311Q8N616 AC092580.3-201ENST00000430932 139 ntBASIC12.84□□□□□ -0.35
LINC00311Q8N616 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC12.84□□□□□ -0.35
LINC00311Q8N616 METTL21AP1-201ENST00000438852 635 ntBASIC12.84□□□□□ -0.35
LINC00311Q8N616 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC12.84□□□□□ -0.35
LINC00311Q8N616 SLED1-202ENST00000512051 380 ntBASIC12.84□□□□□ -0.35
LINC00311Q8N616 SDHAP3-202ENST00000515467 728 ntBASIC12.84□□□□□ -0.35
LINC00311Q8N616 AC027369.6-201ENST00000525520 931 ntBASIC12.84□□□□□ -0.35
LINC00311Q8N616 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC12.84□□□□□ -0.35
LINC00311Q8N616 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
LINC00311Q8N616 AL512361.1-201ENST00000554200 418 ntBASIC12.84□□□□□ -0.35
LINC00311Q8N616 AC104640.1-201ENST00000562617 2109 ntBASIC12.84□□□□□ -0.35
LINC00311Q8N616 AC010336.2-201ENST00000564226 506 ntBASIC12.84□□□□□ -0.35
LINC00311Q8N616 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
LINC00311Q8N616 AC074044.1-201ENST00000609673 707 ntBASIC12.84□□□□□ -0.35
LINC00311Q8N616 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC12.84□□□□□ -0.35
LINC00311Q8N616 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC12.84□□□□□ -0.35
LINC00311Q8N616 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
LINC00311Q8N616 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC12.84□□□□□ -0.35
LINC00311Q8N616 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC12.84□□□□□ -0.35
LINC00311Q8N616 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
LINC00311Q8N616 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC12.84□□□□□ -0.35
LINC00311Q8N616 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
LINC00311Q8N616 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
LINC00311Q8N616 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LINC00311Q8N616 AC132872.4-202ENST00000622924 2756 ntBASIC12.84□□□□□ -0.35
LINC00311Q8N616 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LINC00311Q8N616 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LINC00311Q8N616 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
LINC00311Q8N616 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC12.84□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms