Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
TTC9CQ8N5M4 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC12.62□□□□□ -0.39
TTC9CQ8N5M4 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TTC9CQ8N5M4 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TTC9CQ8N5M4 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
TTC9CQ8N5M4 RBPMS2P1-201ENST00000437762 623 ntBASIC12.62□□□□□ -0.39
TTC9CQ8N5M4 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC12.62□□□□□ -0.39
TTC9CQ8N5M4 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC12.62□□□□□ -0.39
TTC9CQ8N5M4 MDH2-205ENST00000461263 648 ntTSL 2 BASIC12.62□□□□□ -0.39
TTC9CQ8N5M4 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC12.62□□□□□ -0.39
TTC9CQ8N5M4 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TTC9CQ8N5M4 GATD1-206ENST00000526325 756 ntTSL 5 BASIC12.62□□□□□ -0.39
TTC9CQ8N5M4 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
TTC9CQ8N5M4 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
TTC9CQ8N5M4 AC093520.2-201ENST00000561830 333 ntBASIC12.62□□□□□ -0.39
TTC9CQ8N5M4 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
TTC9CQ8N5M4 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC12.62□□□□□ -0.39
TTC9CQ8N5M4 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC12.62□□□□□ -0.39
TTC9CQ8N5M4 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TTC9CQ8N5M4 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TTC9CQ8N5M4 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TTC9CQ8N5M4 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
TTC9CQ8N5M4 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TTC9CQ8N5M4 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TTC9CQ8N5M4 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC12.62□□□□□ -0.39
TTC9CQ8N5M4 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC12.62□□□□□ -0.39
TTC9CQ8N5M4 AL136982.4-201ENST00000437689 1740 ntBASIC12.62□□□□□ -0.39
TTC9CQ8N5M4 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TTC9CQ8N5M4 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TTC9CQ8N5M4 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TTC9CQ8N5M4 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TTC9CQ8N5M4 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TTC9CQ8N5M4 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
TTC9CQ8N5M4 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC12.61□□□□□ -0.39
TTC9CQ8N5M4 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TTC9CQ8N5M4 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TTC9CQ8N5M4 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TTC9CQ8N5M4 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TTC9CQ8N5M4 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC12.61□□□□□ -0.39
TTC9CQ8N5M4 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TTC9CQ8N5M4 CYP4F24P-201ENST00000586049 1580 ntBASIC12.61□□□□□ -0.39
TTC9CQ8N5M4 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TTC9CQ8N5M4 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TTC9CQ8N5M4 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TTC9CQ8N5M4 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
TTC9CQ8N5M4 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TTC9CQ8N5M4 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TTC9CQ8N5M4 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TTC9CQ8N5M4 BANP-201ENST00000286122 2368 ntTSL 5 BASIC12.61□□□□□ -0.39
TTC9CQ8N5M4 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC12.61□□□□□ -0.39
TTC9CQ8N5M4 AP006288.1-201ENST00000446065 395 ntBASIC12.61□□□□□ -0.39
TTC9CQ8N5M4 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC12.61□□□□□ -0.39
TTC9CQ8N5M4 AC023141.5-201ENST00000458585 616 ntBASIC12.61□□□□□ -0.39
TTC9CQ8N5M4 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC12.61□□□□□ -0.39
TTC9CQ8N5M4 CCDC74BP1-201ENST00000508880 1123 ntBASIC12.61□□□□□ -0.39
TTC9CQ8N5M4 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC12.61□□□□□ -0.39
TTC9CQ8N5M4 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC12.61□□□□□ -0.39
TTC9CQ8N5M4 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC12.61□□□□□ -0.39
TTC9CQ8N5M4 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
TTC9CQ8N5M4 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC12.61□□□□□ -0.39
TTC9CQ8N5M4 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC12.61□□□□□ -0.39
TTC9CQ8N5M4 METTL23-205ENST00000588302 925 ntTSL 5 BASIC12.61□□□□□ -0.39
TTC9CQ8N5M4 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TTC9CQ8N5M4 AC009093.7-201ENST00000623853 1223 ntBASIC12.61□□□□□ -0.39
TTC9CQ8N5M4 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
TTC9CQ8N5M4 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TTC9CQ8N5M4 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
TTC9CQ8N5M4 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TTC9CQ8N5M4 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TTC9CQ8N5M4 AL161772.1-201ENST00000610494 4412 ntBASIC12.61□□□□□ -0.39
TTC9CQ8N5M4 LOX-206ENST00000639739 1626 ntTSL 5 BASIC12.61□□□□□ -0.39
TTC9CQ8N5M4 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TTC9CQ8N5M4 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
TTC9CQ8N5M4 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
TTC9CQ8N5M4 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TTC9CQ8N5M4 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
TTC9CQ8N5M4 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
TTC9CQ8N5M4 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
TTC9CQ8N5M4 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TTC9CQ8N5M4 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TTC9CQ8N5M4 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TTC9CQ8N5M4 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
TTC9CQ8N5M4 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC12.61□□□□□ -0.39
TTC9CQ8N5M4 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
TTC9CQ8N5M4 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC12.6□□□□□ -0.39
TTC9CQ8N5M4 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TTC9CQ8N5M4 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TTC9CQ8N5M4 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TTC9CQ8N5M4 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC12.6□□□□□ -0.39
TTC9CQ8N5M4 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC12.6□□□□□ -0.39
TTC9CQ8N5M4 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TTC9CQ8N5M4 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
TTC9CQ8N5M4 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
TTC9CQ8N5M4 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC12.6□□□□□ -0.39
TTC9CQ8N5M4 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TTC9CQ8N5M4 REXO1L1P-202ENST00000608646 1974 ntBASIC12.6□□□□□ -0.39
TTC9CQ8N5M4 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
TTC9CQ8N5M4 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TTC9CQ8N5M4 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
TTC9CQ8N5M4 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms