Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 HNRNPUP1-201ENST00000554987 333 ntBASIC17.65■□□□□ 0.42
CCDC65Q8IXS2 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CCDC65Q8IXS2 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC17.65■□□□□ 0.42
CCDC65Q8IXS2 COQ4-205ENST00000609948 956 ntTSL 2 BASIC17.65■□□□□ 0.42
CCDC65Q8IXS2 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC65Q8IXS2 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC17.65■□□□□ 0.42
CCDC65Q8IXS2 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC65Q8IXS2 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
CCDC65Q8IXS2 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC17.65■□□□□ 0.42
CCDC65Q8IXS2 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC17.65■□□□□ 0.42
CCDC65Q8IXS2 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
CCDC65Q8IXS2 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC65Q8IXS2 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC65Q8IXS2 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC65Q8IXS2 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
CCDC65Q8IXS2 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
CCDC65Q8IXS2 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC17.64■□□□□ 0.42
CCDC65Q8IXS2 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CCDC65Q8IXS2 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC17.64■□□□□ 0.41
CCDC65Q8IXS2 ILF3-AS1-201ENST00000591501 1983 ntBASIC17.64■□□□□ 0.41
CCDC65Q8IXS2 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC17.64■□□□□ 0.41
CCDC65Q8IXS2 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC17.64■□□□□ 0.41
CCDC65Q8IXS2 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC65Q8IXS2 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC17.64■□□□□ 0.41
CCDC65Q8IXS2 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC65Q8IXS2 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC65Q8IXS2 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
CCDC65Q8IXS2 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
CCDC65Q8IXS2 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC65Q8IXS2 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC65Q8IXS2 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC65Q8IXS2 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC65Q8IXS2 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC65Q8IXS2 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC65Q8IXS2 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC17.64■□□□□ 0.41
CCDC65Q8IXS2 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC17.64■□□□□ 0.41
CCDC65Q8IXS2 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC65Q8IXS2 URGCP-206ENST00000446958 365 ntTSL 2 BASIC17.64■□□□□ 0.41
CCDC65Q8IXS2 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC65Q8IXS2 PPP6R2P1-201ENST00000450880 1275 ntBASIC17.64■□□□□ 0.41
CCDC65Q8IXS2 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC65Q8IXS2 SATB1-217ENST00000493952 626 ntTSL 3 BASIC17.64■□□□□ 0.41
CCDC65Q8IXS2 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC17.64■□□□□ 0.41
CCDC65Q8IXS2 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC17.64■□□□□ 0.41
CCDC65Q8IXS2 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC17.64■□□□□ 0.41
CCDC65Q8IXS2 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC65Q8IXS2 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC65Q8IXS2 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC65Q8IXS2 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC65Q8IXS2 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC17.64■□□□□ 0.41
CCDC65Q8IXS2 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
CCDC65Q8IXS2 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC17.64■□□□□ 0.41
CCDC65Q8IXS2 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC65Q8IXS2 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC65Q8IXS2 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC65Q8IXS2 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC65Q8IXS2 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC17.64■□□□□ 0.41
CCDC65Q8IXS2 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC65Q8IXS2 AC092850.2-201ENST00000623821 2697 ntBASIC17.64■□□□□ 0.41
CCDC65Q8IXS2 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC65Q8IXS2 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC65Q8IXS2 TKT-202ENST00000423516 2075 ntTSL 2 BASIC17.63■□□□□ 0.41
CCDC65Q8IXS2 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC65Q8IXS2 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC17.63■□□□□ 0.41
CCDC65Q8IXS2 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC65Q8IXS2 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC65Q8IXS2 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
CCDC65Q8IXS2 AC020658.6-201ENST00000623564 1870 ntBASIC17.63■□□□□ 0.41
CCDC65Q8IXS2 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC65Q8IXS2 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC65Q8IXS2 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
CCDC65Q8IXS2 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC17.63■□□□□ 0.41
CCDC65Q8IXS2 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC65Q8IXS2 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC65Q8IXS2 KLK8-202ENST00000320838 456 ntTSL 5 BASIC17.63■□□□□ 0.41
CCDC65Q8IXS2 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
CCDC65Q8IXS2 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC65Q8IXS2 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
CCDC65Q8IXS2 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC65Q8IXS2 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC17.63■□□□□ 0.41
CCDC65Q8IXS2 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC17.63■□□□□ 0.41
CCDC65Q8IXS2 AC097359.3-201ENST00000603982 1210 ntBASIC17.63■□□□□ 0.41
CCDC65Q8IXS2 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CCDC65Q8IXS2 GPER1-207ENST00000619052 571 ntTSL 2 BASIC17.63■□□□□ 0.41
CCDC65Q8IXS2 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC17.63■□□□□ 0.41
CCDC65Q8IXS2 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
CCDC65Q8IXS2 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC17.63■□□□□ 0.41
CCDC65Q8IXS2 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC65Q8IXS2 TUBB3P1-201ENST00000405796 1332 ntBASIC17.63■□□□□ 0.41
CCDC65Q8IXS2 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
CCDC65Q8IXS2 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC65Q8IXS2 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
CCDC65Q8IXS2 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC65Q8IXS2 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
CCDC65Q8IXS2 CASK-202ENST00000378158 3848 ntTSL 5 BASIC17.63■□□□□ 0.41
CCDC65Q8IXS2 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC65Q8IXS2 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC65Q8IXS2 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC17.63■□□□□ 0.41
CCDC65Q8IXS2 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC65Q8IXS2 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms