Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
SCUBE3Q8IX30 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.72■□□□□ 0.27
SCUBE3Q8IX30 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC16.72■□□□□ 0.27
SCUBE3Q8IX30 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
SCUBE3Q8IX30 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SCUBE3Q8IX30 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SCUBE3Q8IX30 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SCUBE3Q8IX30 KLK8-202ENST00000320838 456 ntTSL 5 BASIC16.72■□□□□ 0.27
SCUBE3Q8IX30 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SCUBE3Q8IX30 METTL26-204ENST00000397665 558 ntTSL 2 BASIC16.72■□□□□ 0.27
SCUBE3Q8IX30 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC16.72■□□□□ 0.27
SCUBE3Q8IX30 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC16.72■□□□□ 0.27
SCUBE3Q8IX30 AL512638.1-201ENST00000457493 794 ntBASIC16.72■□□□□ 0.27
SCUBE3Q8IX30 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC16.72■□□□□ 0.27
SCUBE3Q8IX30 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC16.72■□□□□ 0.27
SCUBE3Q8IX30 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC16.72■□□□□ 0.27
SCUBE3Q8IX30 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC16.72■□□□□ 0.27
SCUBE3Q8IX30 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC16.72■□□□□ 0.27
SCUBE3Q8IX30 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC16.72■□□□□ 0.27
SCUBE3Q8IX30 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
SCUBE3Q8IX30 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
SCUBE3Q8IX30 INO80C-206ENST00000586489 594 ntTSL 3 BASIC16.72■□□□□ 0.27
SCUBE3Q8IX30 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
SCUBE3Q8IX30 AC097359.3-201ENST00000603982 1210 ntBASIC16.72■□□□□ 0.27
SCUBE3Q8IX30 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SCUBE3Q8IX30 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC16.72■□□□□ 0.27
SCUBE3Q8IX30 RAB34-223ENST00000636154 730 ntTSL 2 BASIC16.72■□□□□ 0.27
SCUBE3Q8IX30 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SCUBE3Q8IX30 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC16.72■□□□□ 0.27
SCUBE3Q8IX30 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC16.72■□□□□ 0.27
SCUBE3Q8IX30 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SCUBE3Q8IX30 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
SCUBE3Q8IX30 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SCUBE3Q8IX30 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
SCUBE3Q8IX30 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SCUBE3Q8IX30 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
SCUBE3Q8IX30 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SCUBE3Q8IX30 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SCUBE3Q8IX30 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SCUBE3Q8IX30 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
SCUBE3Q8IX30 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
SCUBE3Q8IX30 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
SCUBE3Q8IX30 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC16.71■□□□□ 0.27
SCUBE3Q8IX30 GRN-214ENST00000589265 1632 ntTSL 5 BASIC16.71■□□□□ 0.27
SCUBE3Q8IX30 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SCUBE3Q8IX30 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SCUBE3Q8IX30 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SCUBE3Q8IX30 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
SCUBE3Q8IX30 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SCUBE3Q8IX30 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC16.71■□□□□ 0.27
SCUBE3Q8IX30 BASP1P1-201ENST00000430708 665 ntBASIC16.71■□□□□ 0.27
SCUBE3Q8IX30 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC16.71■□□□□ 0.27
SCUBE3Q8IX30 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC16.71■□□□□ 0.27
SCUBE3Q8IX30 RN7SL618P-201ENST00000477850 296 ntBASIC16.71■□□□□ 0.27
SCUBE3Q8IX30 AC004890.2-204ENST00000481968 304 ntBASIC16.71■□□□□ 0.27
SCUBE3Q8IX30 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC16.71■□□□□ 0.27
SCUBE3Q8IX30 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC16.71■□□□□ 0.27
SCUBE3Q8IX30 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SCUBE3Q8IX30 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC16.71■□□□□ 0.27
SCUBE3Q8IX30 RN7SL275P-201ENST00000582762 335 ntBASIC16.71■□□□□ 0.27
SCUBE3Q8IX30 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SCUBE3Q8IX30 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC16.71■□□□□ 0.27
SCUBE3Q8IX30 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC16.71■□□□□ 0.27
SCUBE3Q8IX30 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SCUBE3Q8IX30 AC005786.4-201ENST00000623369 682 ntBASIC16.71■□□□□ 0.27
SCUBE3Q8IX30 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
SCUBE3Q8IX30 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SCUBE3Q8IX30 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SCUBE3Q8IX30 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC16.71■□□□□ 0.27
SCUBE3Q8IX30 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SCUBE3Q8IX30 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SCUBE3Q8IX30 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
SCUBE3Q8IX30 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SCUBE3Q8IX30 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC16.71■□□□□ 0.27
SCUBE3Q8IX30 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.71■□□□□ 0.26
SCUBE3Q8IX30 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
SCUBE3Q8IX30 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
SCUBE3Q8IX30 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SCUBE3Q8IX30 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC16.7■□□□□ 0.26
SCUBE3Q8IX30 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SCUBE3Q8IX30 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SCUBE3Q8IX30 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SCUBE3Q8IX30 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SCUBE3Q8IX30 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SCUBE3Q8IX30 CICP6-201ENST00000457191 2729 ntBASIC16.7■□□□□ 0.26
SCUBE3Q8IX30 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.7■□□□□ 0.26
SCUBE3Q8IX30 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SCUBE3Q8IX30 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SCUBE3Q8IX30 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SCUBE3Q8IX30 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SCUBE3Q8IX30 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.7■□□□□ 0.26
SCUBE3Q8IX30 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SCUBE3Q8IX30 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC16.7■□□□□ 0.26
SCUBE3Q8IX30 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SCUBE3Q8IX30 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SCUBE3Q8IX30 GK-202ENST00000378941 458 ntTSL 3 BASIC16.7■□□□□ 0.26
SCUBE3Q8IX30 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC16.7■□□□□ 0.26
SCUBE3Q8IX30 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC16.7■□□□□ 0.26
SCUBE3Q8IX30 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
SCUBE3Q8IX30 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms