Protein–RNA interactions for Protein: Q86WR0

CCDC25, Coiled-coil domain-containing protein 25, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC25Q86WR0 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC25Q86WR0 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC16.5■□□□□ 0.23
CCDC25Q86WR0 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC25Q86WR0 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
CCDC25Q86WR0 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC25Q86WR0 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC25Q86WR0 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC25Q86WR0 POLL-217ENST00000628479 1953 ntTSL 5 BASIC16.5■□□□□ 0.23
CCDC25Q86WR0 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC16.5■□□□□ 0.23
CCDC25Q86WR0 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC25Q86WR0 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC25Q86WR0 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
CCDC25Q86WR0 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC16.5■□□□□ 0.23
CCDC25Q86WR0 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC16.5■□□□□ 0.23
CCDC25Q86WR0 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC16.5■□□□□ 0.23
CCDC25Q86WR0 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC16.5■□□□□ 0.23
CCDC25Q86WR0 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC16.5■□□□□ 0.23
CCDC25Q86WR0 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC16.5■□□□□ 0.23
CCDC25Q86WR0 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC16.5■□□□□ 0.23
CCDC25Q86WR0 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC16.5■□□□□ 0.23
CCDC25Q86WR0 AC012640.2-201ENST00000561606 901 ntBASIC16.5■□□□□ 0.23
CCDC25Q86WR0 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC16.5■□□□□ 0.23
CCDC25Q86WR0 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC16.5■□□□□ 0.23
CCDC25Q86WR0 MIR4751-201ENST00000578027 74 ntBASIC16.5■□□□□ 0.23
CCDC25Q86WR0 MIR3909-201ENST00000579518 119 ntBASIC16.5■□□□□ 0.23
CCDC25Q86WR0 AL365330.1-201ENST00000607459 531 ntBASIC16.5■□□□□ 0.23
CCDC25Q86WR0 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC25Q86WR0 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
CCDC25Q86WR0 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC25Q86WR0 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC25Q86WR0 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC25Q86WR0 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC16.5■□□□□ 0.23
CCDC25Q86WR0 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC16.5■□□□□ 0.23
CCDC25Q86WR0 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC25Q86WR0 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC16.5■□□□□ 0.23
CCDC25Q86WR0 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC16.49■□□□□ 0.23
CCDC25Q86WR0 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
CCDC25Q86WR0 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC25Q86WR0 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC16.49■□□□□ 0.23
CCDC25Q86WR0 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC25Q86WR0 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC16.49■□□□□ 0.23
CCDC25Q86WR0 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
CCDC25Q86WR0 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC16.49■□□□□ 0.23
CCDC25Q86WR0 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC16.49■□□□□ 0.23
CCDC25Q86WR0 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC16.49■□□□□ 0.23
CCDC25Q86WR0 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC16.49■□□□□ 0.23
CCDC25Q86WR0 POR-201ENST00000394893 2532 ntTSL 5 BASIC16.49■□□□□ 0.23
CCDC25Q86WR0 C18orf15-201ENST00000623680 2534 ntBASIC16.49■□□□□ 0.23
CCDC25Q86WR0 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC25Q86WR0 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC25Q86WR0 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
CCDC25Q86WR0 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC25Q86WR0 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC16.49■□□□□ 0.23
CCDC25Q86WR0 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC16.49■□□□□ 0.23
CCDC25Q86WR0 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC25Q86WR0 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC16.49■□□□□ 0.23
CCDC25Q86WR0 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC16.49■□□□□ 0.23
CCDC25Q86WR0 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC25Q86WR0 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC16.49■□□□□ 0.23
CCDC25Q86WR0 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC16.49■□□□□ 0.23
CCDC25Q86WR0 AL645728.2-201ENST00000641974 660 ntBASIC16.49■□□□□ 0.23
CCDC25Q86WR0 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC16.49■□□□□ 0.23
CCDC25Q86WR0 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC25Q86WR0 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC25Q86WR0 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC25Q86WR0 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC16.49■□□□□ 0.23
CCDC25Q86WR0 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC25Q86WR0 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC25Q86WR0 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC25Q86WR0 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC16.49■□□□□ 0.23
CCDC25Q86WR0 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC25Q86WR0 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC16.49■□□□□ 0.23
CCDC25Q86WR0 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC16.49■□□□□ 0.23
CCDC25Q86WR0 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC25Q86WR0 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC25Q86WR0 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC25Q86WR0 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC25Q86WR0 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC25Q86WR0 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
CCDC25Q86WR0 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC25Q86WR0 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC25Q86WR0 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC25Q86WR0 AC009090.5-201ENST00000624886 2285 ntBASIC16.48■□□□□ 0.23
CCDC25Q86WR0 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC25Q86WR0 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC25Q86WR0 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC25Q86WR0 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC16.48■□□□□ 0.23
CCDC25Q86WR0 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC25Q86WR0 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC25Q86WR0 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC25Q86WR0 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC16.48■□□□□ 0.23
CCDC25Q86WR0 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
CCDC25Q86WR0 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
CCDC25Q86WR0 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC16.48■□□□□ 0.23
CCDC25Q86WR0 AC245100.5-201ENST00000452108 331 ntBASIC16.48■□□□□ 0.23
CCDC25Q86WR0 KRT18P34-201ENST00000488218 1270 ntBASIC16.48■□□□□ 0.23
CCDC25Q86WR0 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC25Q86WR0 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC16.48■□□□□ 0.23
CCDC25Q86WR0 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC16.48■□□□□ 0.23
CCDC25Q86WR0 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms