Protein–RNA interactions for Protein: Q6ZMN8

CCNI2, Cyclin-I2, humanhuman

Predicted RBP Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNI2Q6ZMN8 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC16.93■□□□□ 0.3
CCNI2Q6ZMN8 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CCNI2Q6ZMN8 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCNI2Q6ZMN8 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.93■□□□□ 0.3
CCNI2Q6ZMN8 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCNI2Q6ZMN8 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CCNI2Q6ZMN8 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCNI2Q6ZMN8 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCNI2Q6ZMN8 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CCNI2Q6ZMN8 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC16.93■□□□□ 0.3
CCNI2Q6ZMN8 ACTG1P14-201ENST00000446382 1122 ntBASIC16.93■□□□□ 0.3
CCNI2Q6ZMN8 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC16.93■□□□□ 0.3
CCNI2Q6ZMN8 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
CCNI2Q6ZMN8 PUDP-206ENST00000540122 825 ntTSL 2 BASIC16.93■□□□□ 0.3
CCNI2Q6ZMN8 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC16.93■□□□□ 0.3
CCNI2Q6ZMN8 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC16.93■□□□□ 0.3
CCNI2Q6ZMN8 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
CCNI2Q6ZMN8 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC16.93■□□□□ 0.3
CCNI2Q6ZMN8 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCNI2Q6ZMN8 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
CCNI2Q6ZMN8 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CCNI2Q6ZMN8 NCF1C-201ENST00000438382 1427 ntBASIC16.93■□□□□ 0.3
CCNI2Q6ZMN8 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CCNI2Q6ZMN8 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCNI2Q6ZMN8 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CCNI2Q6ZMN8 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCNI2Q6ZMN8 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCNI2Q6ZMN8 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC16.93■□□□□ 0.3
CCNI2Q6ZMN8 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCNI2Q6ZMN8 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCNI2Q6ZMN8 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC16.93■□□□□ 0.3
CCNI2Q6ZMN8 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCNI2Q6ZMN8 MARS-233ENST00000628866 2583 ntTSL 5 BASIC16.92■□□□□ 0.3
CCNI2Q6ZMN8 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
CCNI2Q6ZMN8 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CCNI2Q6ZMN8 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC16.92■□□□□ 0.3
CCNI2Q6ZMN8 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CCNI2Q6ZMN8 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16.92■□□□□ 0.3
CCNI2Q6ZMN8 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC16.92■□□□□ 0.3
CCNI2Q6ZMN8 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
CCNI2Q6ZMN8 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCNI2Q6ZMN8 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCNI2Q6ZMN8 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCNI2Q6ZMN8 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CCNI2Q6ZMN8 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC16.92■□□□□ 0.3
CCNI2Q6ZMN8 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CCNI2Q6ZMN8 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCNI2Q6ZMN8 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CCNI2Q6ZMN8 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCNI2Q6ZMN8 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCNI2Q6ZMN8 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCNI2Q6ZMN8 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CCNI2Q6ZMN8 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
CCNI2Q6ZMN8 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CCNI2Q6ZMN8 MIR4745-201ENST00000577608 62 ntBASIC16.92■□□□□ 0.3
CCNI2Q6ZMN8 LSM12-202ENST00000585388 942 ntTSL 3 BASIC16.92■□□□□ 0.3
CCNI2Q6ZMN8 INO80C-206ENST00000586489 594 ntTSL 3 BASIC16.92■□□□□ 0.3
CCNI2Q6ZMN8 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC16.92■□□□□ 0.3
CCNI2Q6ZMN8 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC16.92■□□□□ 0.3
CCNI2Q6ZMN8 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CCNI2Q6ZMN8 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CCNI2Q6ZMN8 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC16.92■□□□□ 0.3
CCNI2Q6ZMN8 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCNI2Q6ZMN8 AC006504.4-201ENST00000592118 1568 ntBASIC16.92■□□□□ 0.3
CCNI2Q6ZMN8 GRK6P1-201ENST00000400595 1711 ntBASIC16.92■□□□□ 0.3
CCNI2Q6ZMN8 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCNI2Q6ZMN8 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
CCNI2Q6ZMN8 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCNI2Q6ZMN8 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCNI2Q6ZMN8 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
CCNI2Q6ZMN8 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCNI2Q6ZMN8 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCNI2Q6ZMN8 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC16.92■□□□□ 0.3
CCNI2Q6ZMN8 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCNI2Q6ZMN8 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC16.92■□□□□ 0.3
CCNI2Q6ZMN8 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCNI2Q6ZMN8 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCNI2Q6ZMN8 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCNI2Q6ZMN8 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCNI2Q6ZMN8 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CCNI2Q6ZMN8 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC16.91■□□□□ 0.3
CCNI2Q6ZMN8 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCNI2Q6ZMN8 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC16.91■□□□□ 0.3
CCNI2Q6ZMN8 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CCNI2Q6ZMN8 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCNI2Q6ZMN8 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CCNI2Q6ZMN8 COCH-203ENST00000460581 2688 ntTSL 2 BASIC16.91■□□□□ 0.3
CCNI2Q6ZMN8 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
CCNI2Q6ZMN8 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCNI2Q6ZMN8 PARN-202ENST00000420015 2360 ntTSL 2 BASIC16.91■□□□□ 0.3
CCNI2Q6ZMN8 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCNI2Q6ZMN8 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCNI2Q6ZMN8 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
CCNI2Q6ZMN8 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CCNI2Q6ZMN8 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCNI2Q6ZMN8 ELK2BP-201ENST00000415014 1224 ntBASIC16.91■□□□□ 0.3
CCNI2Q6ZMN8 ARTN-206ENST00000472435 402 ntTSL 3 BASIC16.91■□□□□ 0.3
CCNI2Q6ZMN8 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC16.91■□□□□ 0.3
CCNI2Q6ZMN8 IGHV3-65-201ENST00000523210 341 ntBASIC16.91■□□□□ 0.3
CCNI2Q6ZMN8 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms