Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CTC1Q2NKJ3 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CTC1Q2NKJ3 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CTC1Q2NKJ3 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CTC1Q2NKJ3 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CTC1Q2NKJ3 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC16.96■□□□□ 0.31
CTC1Q2NKJ3 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CTC1Q2NKJ3 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CTC1Q2NKJ3 AC005229.1-201ENST00000392885 409 ntBASIC16.96■□□□□ 0.31
CTC1Q2NKJ3 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CTC1Q2NKJ3 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC16.96■□□□□ 0.31
CTC1Q2NKJ3 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC16.96■□□□□ 0.31
CTC1Q2NKJ3 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC16.96■□□□□ 0.31
CTC1Q2NKJ3 EMC4-209ENST00000559421 497 ntTSL 2 BASIC16.96■□□□□ 0.31
CTC1Q2NKJ3 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
CTC1Q2NKJ3 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC16.96■□□□□ 0.31
CTC1Q2NKJ3 MIR3615-201ENST00000581999 87 ntBASIC16.96■□□□□ 0.31
CTC1Q2NKJ3 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC16.96■□□□□ 0.31
CTC1Q2NKJ3 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
CTC1Q2NKJ3 RETN-203ENST00000629642 400 ntTSL 5 BASIC16.96■□□□□ 0.31
CTC1Q2NKJ3 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC16.96■□□□□ 0.31
CTC1Q2NKJ3 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CTC1Q2NKJ3 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CTC1Q2NKJ3 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
CTC1Q2NKJ3 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CTC1Q2NKJ3 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CTC1Q2NKJ3 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
CTC1Q2NKJ3 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CTC1Q2NKJ3 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CTC1Q2NKJ3 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CTC1Q2NKJ3 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
CTC1Q2NKJ3 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.96■□□□□ 0.3
CTC1Q2NKJ3 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CTC1Q2NKJ3 Z97205.2-201ENST00000564697 1639 ntBASIC16.96■□□□□ 0.3
CTC1Q2NKJ3 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC16.96■□□□□ 0.3
CTC1Q2NKJ3 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.95■□□□□ 0.3
CTC1Q2NKJ3 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CTC1Q2NKJ3 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CTC1Q2NKJ3 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
CTC1Q2NKJ3 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CTC1Q2NKJ3 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.95■□□□□ 0.3
CTC1Q2NKJ3 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CTC1Q2NKJ3 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC16.95■□□□□ 0.3
CTC1Q2NKJ3 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
CTC1Q2NKJ3 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
CTC1Q2NKJ3 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CTC1Q2NKJ3 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC16.95■□□□□ 0.3
CTC1Q2NKJ3 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CTC1Q2NKJ3 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CTC1Q2NKJ3 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CTC1Q2NKJ3 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CTC1Q2NKJ3 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CTC1Q2NKJ3 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CTC1Q2NKJ3 APOA1-205ENST00000375329 927 ntTSL 2 BASIC16.95■□□□□ 0.3
CTC1Q2NKJ3 AC092506.1-202ENST00000401022 528 ntBASIC16.95■□□□□ 0.3
CTC1Q2NKJ3 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC16.95■□□□□ 0.3
CTC1Q2NKJ3 PFN1P12-201ENST00000455938 534 ntBASIC16.95■□□□□ 0.3
CTC1Q2NKJ3 ZNF767P-206ENST00000513792 565 ntBASIC16.95■□□□□ 0.3
CTC1Q2NKJ3 TDH-203ENST00000531764 1110 ntBASIC16.95■□□□□ 0.3
CTC1Q2NKJ3 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC16.95■□□□□ 0.3
CTC1Q2NKJ3 ARL16-210ENST00000574938 751 ntTSL 2 BASIC16.95■□□□□ 0.3
CTC1Q2NKJ3 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC16.95■□□□□ 0.3
CTC1Q2NKJ3 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC16.95■□□□□ 0.3
CTC1Q2NKJ3 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC16.95■□□□□ 0.3
CTC1Q2NKJ3 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CTC1Q2NKJ3 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CTC1Q2NKJ3 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CTC1Q2NKJ3 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CTC1Q2NKJ3 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.95■□□□□ 0.3
CTC1Q2NKJ3 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
CTC1Q2NKJ3 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CTC1Q2NKJ3 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.95■□□□□ 0.3
CTC1Q2NKJ3 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CTC1Q2NKJ3 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC16.95■□□□□ 0.3
CTC1Q2NKJ3 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
CTC1Q2NKJ3 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CTC1Q2NKJ3 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
CTC1Q2NKJ3 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CTC1Q2NKJ3 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
CTC1Q2NKJ3 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CTC1Q2NKJ3 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
CTC1Q2NKJ3 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CTC1Q2NKJ3 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.94■□□□□ 0.3
CTC1Q2NKJ3 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.94■□□□□ 0.3
CTC1Q2NKJ3 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CTC1Q2NKJ3 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CTC1Q2NKJ3 HNRNPA1P48-201ENST00000562726 1377 ntBASIC16.94■□□□□ 0.3
CTC1Q2NKJ3 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
CTC1Q2NKJ3 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC16.94■□□□□ 0.3
CTC1Q2NKJ3 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CTC1Q2NKJ3 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CTC1Q2NKJ3 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CTC1Q2NKJ3 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CTC1Q2NKJ3 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CTC1Q2NKJ3 ELK2AP-201ENST00000392510 1007 ntBASIC16.94■□□□□ 0.3
CTC1Q2NKJ3 MIR1247-201ENST00000408206 136 ntBASIC16.94■□□□□ 0.3
CTC1Q2NKJ3 GPAA1P2-201ENST00000417923 928 ntBASIC16.94■□□□□ 0.3
CTC1Q2NKJ3 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
CTC1Q2NKJ3 AC007551.1-201ENST00000457394 519 ntBASIC16.94■□□□□ 0.3
CTC1Q2NKJ3 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms