Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CX3CL1P78423 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
CX3CL1P78423 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
CX3CL1P78423 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
CX3CL1P78423 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CX3CL1P78423 TNRC18P2-201ENST00000417666 2714 ntBASIC12.89□□□□□ -0.35
CX3CL1P78423 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
CX3CL1P78423 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CX3CL1P78423 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CX3CL1P78423 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC12.88□□□□□ -0.35
CX3CL1P78423 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CX3CL1P78423 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CX3CL1P78423 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CX3CL1P78423 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC12.88□□□□□ -0.35
CX3CL1P78423 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
CX3CL1P78423 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC12.88□□□□□ -0.35
CX3CL1P78423 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CX3CL1P78423 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
CX3CL1P78423 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC12.88□□□□□ -0.35
CX3CL1P78423 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CX3CL1P78423 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC12.88□□□□□ -0.35
CX3CL1P78423 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
CX3CL1P78423 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CX3CL1P78423 AC073347.1-201ENST00000421633 2643 ntBASIC12.88□□□□□ -0.35
CX3CL1P78423 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CX3CL1P78423 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
CX3CL1P78423 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CX3CL1P78423 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC12.88□□□□□ -0.35
CX3CL1P78423 FAM220BP-201ENST00000377689 816 ntBASIC12.88□□□□□ -0.35
CX3CL1P78423 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CX3CL1P78423 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CX3CL1P78423 MIR1233-2-201ENST00000408138 82 ntBASIC12.88□□□□□ -0.35
CX3CL1P78423 MIR1233-1-201ENST00000408722 82 ntBASIC12.88□□□□□ -0.35
CX3CL1P78423 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC12.88□□□□□ -0.35
CX3CL1P78423 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
CX3CL1P78423 AC004967.1-201ENST00000453589 447 ntBASIC12.88□□□□□ -0.35
CX3CL1P78423 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC12.88□□□□□ -0.35
CX3CL1P78423 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CX3CL1P78423 RNA5SP410-201ENST00000516285 106 ntBASIC12.88□□□□□ -0.35
CX3CL1P78423 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CX3CL1P78423 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC12.88□□□□□ -0.35
CX3CL1P78423 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CX3CL1P78423 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC12.88□□□□□ -0.35
CX3CL1P78423 AC023511.2-201ENST00000618803 211 ntBASIC12.88□□□□□ -0.35
CX3CL1P78423 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
CX3CL1P78423 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC12.88□□□□□ -0.35
CX3CL1P78423 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CX3CL1P78423 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC12.88□□□□□ -0.35
CX3CL1P78423 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
CX3CL1P78423 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC12.88□□□□□ -0.35
CX3CL1P78423 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC12.88□□□□□ -0.35
CX3CL1P78423 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
CX3CL1P78423 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CX3CL1P78423 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC12.88□□□□□ -0.35
CX3CL1P78423 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC12.88□□□□□ -0.35
CX3CL1P78423 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC12.88□□□□□ -0.35
CX3CL1P78423 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CX3CL1P78423 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CX3CL1P78423 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CX3CL1P78423 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC12.88□□□□□ -0.35
CX3CL1P78423 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC12.88□□□□□ -0.35
CX3CL1P78423 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CX3CL1P78423 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC12.88□□□□□ -0.35
CX3CL1P78423 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CX3CL1P78423 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
CX3CL1P78423 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC12.88□□□□□ -0.35
CX3CL1P78423 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CX3CL1P78423 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CX3CL1P78423 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CX3CL1P78423 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CX3CL1P78423 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC12.88□□□□□ -0.35
CX3CL1P78423 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
CX3CL1P78423 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CX3CL1P78423 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
CX3CL1P78423 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
CX3CL1P78423 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
CX3CL1P78423 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
CX3CL1P78423 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
CX3CL1P78423 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CX3CL1P78423 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CX3CL1P78423 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CX3CL1P78423 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
CX3CL1P78423 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CX3CL1P78423 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC12.87□□□□□ -0.35
CX3CL1P78423 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
CX3CL1P78423 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CX3CL1P78423 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CX3CL1P78423 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC12.87□□□□□ -0.35
CX3CL1P78423 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CX3CL1P78423 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC12.87□□□□□ -0.35
CX3CL1P78423 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CX3CL1P78423 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC12.87□□□□□ -0.35
CX3CL1P78423 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC12.87□□□□□ -0.35
CX3CL1P78423 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC12.87□□□□□ -0.35
CX3CL1P78423 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC12.87□□□□□ -0.35
CX3CL1P78423 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CX3CL1P78423 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC12.87□□□□□ -0.35
CX3CL1P78423 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC12.87□□□□□ -0.35
CX3CL1P78423 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC12.87□□□□□ -0.35
CX3CL1P78423 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC12.87□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms