Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CMC4P56277 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CMC4P56277 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CMC4P56277 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC11.84□□□□□ -0.51
CMC4P56277 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
CMC4P56277 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CMC4P56277 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CMC4P56277 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CMC4P56277 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC11.84□□□□□ -0.51
CMC4P56277 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CMC4P56277 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC11.84□□□□□ -0.51
CMC4P56277 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC11.84□□□□□ -0.51
CMC4P56277 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC11.84□□□□□ -0.51
CMC4P56277 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC11.84□□□□□ -0.51
CMC4P56277 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC11.84□□□□□ -0.51
CMC4P56277 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC11.84□□□□□ -0.51
CMC4P56277 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC11.84□□□□□ -0.51
CMC4P56277 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
CMC4P56277 AC134407.2-201ENST00000625089 1978 ntBASIC11.84□□□□□ -0.51
CMC4P56277 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC11.84□□□□□ -0.51
CMC4P56277 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CMC4P56277 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CMC4P56277 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
CMC4P56277 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
CMC4P56277 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC11.84□□□□□ -0.51
CMC4P56277 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CMC4P56277 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC11.84□□□□□ -0.51
CMC4P56277 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC11.84□□□□□ -0.51
CMC4P56277 DEK-201ENST00000244776 1441 ntTSL 2 BASIC11.84□□□□□ -0.51
CMC4P56277 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CMC4P56277 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CMC4P56277 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC11.84□□□□□ -0.51
CMC4P56277 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CMC4P56277 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC11.84□□□□□ -0.51
CMC4P56277 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CMC4P56277 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CMC4P56277 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC11.84□□□□□ -0.51
CMC4P56277 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
CMC4P56277 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC11.84□□□□□ -0.51
CMC4P56277 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.51
CMC4P56277 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
CMC4P56277 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CMC4P56277 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CMC4P56277 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
CMC4P56277 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CMC4P56277 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC11.83□□□□□ -0.52
CMC4P56277 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CMC4P56277 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
CMC4P56277 AC124067.4-201ENST00000519691 2379 ntBASIC11.83□□□□□ -0.52
CMC4P56277 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC11.83□□□□□ -0.52
CMC4P56277 Z97205.2-201ENST00000564697 1639 ntBASIC11.83□□□□□ -0.52
CMC4P56277 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC11.83□□□□□ -0.52
CMC4P56277 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
CMC4P56277 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CMC4P56277 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC11.83□□□□□ -0.52
CMC4P56277 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
CMC4P56277 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CMC4P56277 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC11.83□□□□□ -0.52
CMC4P56277 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CMC4P56277 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CMC4P56277 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
CMC4P56277 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC11.83□□□□□ -0.52
CMC4P56277 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
CMC4P56277 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC11.83□□□□□ -0.52
CMC4P56277 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC11.83□□□□□ -0.52
CMC4P56277 AC136604.1-201ENST00000418535 575 ntBASIC11.83□□□□□ -0.52
CMC4P56277 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC11.83□□□□□ -0.52
CMC4P56277 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC11.83□□□□□ -0.52
CMC4P56277 AL096865.1-201ENST00000606796 927 ntBASIC11.83□□□□□ -0.52
CMC4P56277 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
CMC4P56277 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CMC4P56277 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CMC4P56277 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CMC4P56277 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CMC4P56277 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC11.83□□□□□ -0.52
CMC4P56277 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
CMC4P56277 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CMC4P56277 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CMC4P56277 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC11.83□□□□□ -0.52
CMC4P56277 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CMC4P56277 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
CMC4P56277 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CMC4P56277 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
CMC4P56277 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CMC4P56277 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC11.83□□□□□ -0.52
CMC4P56277 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CMC4P56277 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
CMC4P56277 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CMC4P56277 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
CMC4P56277 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
CMC4P56277 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
CMC4P56277 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
CMC4P56277 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
CMC4P56277 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CMC4P56277 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CMC4P56277 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CMC4P56277 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC11.82□□□□□ -0.52
CMC4P56277 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CMC4P56277 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CMC4P56277 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms