Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CDH4P55283 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC16.2■□□□□ 0.18
CDH4P55283 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDH4P55283 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
CDH4P55283 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
CDH4P55283 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDH4P55283 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDH4P55283 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDH4P55283 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
CDH4P55283 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
CDH4P55283 KRT18P64-201ENST00000434946 1219 ntBASIC16.2■□□□□ 0.18
CDH4P55283 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC16.2■□□□□ 0.18
CDH4P55283 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC16.2■□□□□ 0.18
CDH4P55283 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.2■□□□□ 0.18
CDH4P55283 AC055876.2-201ENST00000531834 546 ntBASIC16.2■□□□□ 0.18
CDH4P55283 AC023310.3-201ENST00000557027 670 ntBASIC16.2■□□□□ 0.18
CDH4P55283 AC100756.1-201ENST00000562736 682 ntBASIC16.2■□□□□ 0.18
CDH4P55283 AC138749.3-201ENST00000567691 622 ntBASIC16.2■□□□□ 0.18
CDH4P55283 COX11-202ENST00000571584 1108 ntTSL 2 BASIC16.2■□□□□ 0.18
CDH4P55283 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC16.2■□□□□ 0.18
CDH4P55283 AC116165.1-201ENST00000611806 668 ntBASIC16.2■□□□□ 0.18
CDH4P55283 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDH4P55283 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CDH4P55283 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC16.2■□□□□ 0.18
CDH4P55283 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDH4P55283 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
CDH4P55283 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDH4P55283 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CDH4P55283 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
CDH4P55283 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CDH4P55283 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDH4P55283 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.2■□□□□ 0.18
CDH4P55283 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
CDH4P55283 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CDH4P55283 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDH4P55283 DEK-201ENST00000244776 1441 ntTSL 2 BASIC16.19■□□□□ 0.18
CDH4P55283 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC16.19■□□□□ 0.18
CDH4P55283 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CDH4P55283 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDH4P55283 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CDH4P55283 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
CDH4P55283 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.19■□□□□ 0.18
CDH4P55283 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
CDH4P55283 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC16.19■□□□□ 0.18
CDH4P55283 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDH4P55283 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CDH4P55283 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CDH4P55283 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.19■□□□□ 0.18
CDH4P55283 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CDH4P55283 SLC7A15P-201ENST00000424028 1363 ntBASIC16.19■□□□□ 0.18
CDH4P55283 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDH4P55283 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CDH4P55283 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CDH4P55283 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDH4P55283 AC087499.6-201ENST00000411576 835 ntBASIC16.19■□□□□ 0.18
CDH4P55283 CRB3P1-201ENST00000449338 276 ntBASIC16.19■□□□□ 0.18
CDH4P55283 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC16.19■□□□□ 0.18
CDH4P55283 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC16.19■□□□□ 0.18
CDH4P55283 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC16.19■□□□□ 0.18
CDH4P55283 CDK4-206ENST00000549606 558 ntTSL 2 BASIC16.19■□□□□ 0.18
CDH4P55283 AC190387.1-201ENST00000551683 408 ntBASIC16.19■□□□□ 0.18
CDH4P55283 COQ6-210ENST00000554920 649 ntTSL 3 BASIC16.19■□□□□ 0.18
CDH4P55283 RARRES2P5-201ENST00000564013 466 ntBASIC16.19■□□□□ 0.18
CDH4P55283 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC16.19■□□□□ 0.18
CDH4P55283 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDH4P55283 LINC02199-201ENST00000506655 2702 ntBASIC16.19■□□□□ 0.18
CDH4P55283 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CDH4P55283 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDH4P55283 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.19■□□□□ 0.18
CDH4P55283 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
CDH4P55283 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CDH4P55283 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDH4P55283 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDH4P55283 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.19■□□□□ 0.18
CDH4P55283 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.19■□□□□ 0.18
CDH4P55283 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CDH4P55283 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDH4P55283 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC16.18■□□□□ 0.18
CDH4P55283 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CDH4P55283 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDH4P55283 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.18■□□□□ 0.18
CDH4P55283 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDH4P55283 AC138969.3-201ENST00000546612 1459 ntBASIC16.18■□□□□ 0.18
CDH4P55283 AC138932.2-201ENST00000548268 1459 ntBASIC16.18■□□□□ 0.18
CDH4P55283 AC126755.4-201ENST00000549796 1459 ntBASIC16.18■□□□□ 0.18
CDH4P55283 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDH4P55283 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.18■□□□□ 0.18
CDH4P55283 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CDH4P55283 AP005117.1-202ENST00000581724 1908 ntBASIC16.18■□□□□ 0.18
CDH4P55283 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDH4P55283 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDH4P55283 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CDH4P55283 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
CDH4P55283 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
CDH4P55283 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDH4P55283 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDH4P55283 PKIG-203ENST00000372887 769 ntTSL 3 BASIC16.18■□□□□ 0.18
CDH4P55283 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
CDH4P55283 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC16.18■□□□□ 0.18
CDH4P55283 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms