Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC16.33■□□□□ 0.2
ATXN3P54252 ARL16-202ENST00000570561 768 ntTSL 2 BASIC16.33■□□□□ 0.2
ATXN3P54252 MPDU1-223ENST00000582151 728 ntBASIC16.33■□□□□ 0.2
ATXN3P54252 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ATXN3P54252 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ATXN3P54252 AL021920.2-201ENST00000624828 1351 ntBASIC16.33■□□□□ 0.2
ATXN3P54252 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ATXN3P54252 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ATXN3P54252 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ATXN3P54252 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ATXN3P54252 FOS-208ENST00000555686 1496 ntTSL 2 BASIC16.33■□□□□ 0.2
ATXN3P54252 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
ATXN3P54252 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC16.33■□□□□ 0.2
ATXN3P54252 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ATXN3P54252 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
ATXN3P54252 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ATXN3P54252 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
ATXN3P54252 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
ATXN3P54252 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ATXN3P54252 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.33■□□□□ 0.2
ATXN3P54252 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
ATXN3P54252 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ATXN3P54252 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ATXN3P54252 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
ATXN3P54252 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.32■□□□□ 0.2
ATXN3P54252 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
ATXN3P54252 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
ATXN3P54252 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ATXN3P54252 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
ATXN3P54252 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
ATXN3P54252 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC16.32■□□□□ 0.2
ATXN3P54252 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ATXN3P54252 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ATXN3P54252 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ATXN3P54252 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
ATXN3P54252 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
ATXN3P54252 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ATXN3P54252 U91328.1-201ENST00000437528 223 ntBASIC16.32■□□□□ 0.2
ATXN3P54252 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
ATXN3P54252 PRYP6-201ENST00000514804 343 ntBASIC16.32■□□□□ 0.2
ATXN3P54252 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC16.32■□□□□ 0.2
ATXN3P54252 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC16.32■□□□□ 0.2
ATXN3P54252 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ATXN3P54252 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ATXN3P54252 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC16.32■□□□□ 0.2
ATXN3P54252 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC16.32■□□□□ 0.2
ATXN3P54252 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC16.32■□□□□ 0.2
ATXN3P54252 PRR29-204ENST00000577953 565 ntTSL 4 BASIC16.32■□□□□ 0.2
ATXN3P54252 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.32■□□□□ 0.2
ATXN3P54252 AL365203.3-201ENST00000609742 2057 ntBASIC16.32■□□□□ 0.2
ATXN3P54252 MIR6799-201ENST00000620297 69 ntBASIC16.32■□□□□ 0.2
ATXN3P54252 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ATXN3P54252 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ATXN3P54252 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ATXN3P54252 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATXN3P54252 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
ATXN3P54252 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.31■□□□□ 0.2
ATXN3P54252 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC16.31■□□□□ 0.2
ATXN3P54252 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ATXN3P54252 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATXN3P54252 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.31■□□□□ 0.2
ATXN3P54252 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATXN3P54252 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
ATXN3P54252 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATXN3P54252 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.31■□□□□ 0.2
ATXN3P54252 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ATXN3P54252 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC16.31■□□□□ 0.2
ATXN3P54252 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ATXN3P54252 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
ATXN3P54252 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATXN3P54252 EGFEM1P-202ENST00000431685 1563 ntBASIC16.31■□□□□ 0.2
ATXN3P54252 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
ATXN3P54252 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.31■□□□□ 0.2
ATXN3P54252 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATXN3P54252 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATXN3P54252 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATXN3P54252 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ATXN3P54252 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ATXN3P54252 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ATXN3P54252 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC16.31■□□□□ 0.2
ATXN3P54252 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATXN3P54252 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC16.31■□□□□ 0.2
ATXN3P54252 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC16.31■□□□□ 0.2
ATXN3P54252 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
ATXN3P54252 AC009477.1-201ENST00000452936 217 ntBASIC16.31■□□□□ 0.2
ATXN3P54252 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ATXN3P54252 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC16.31■□□□□ 0.2
ATXN3P54252 AC073389.1-201ENST00000595595 795 ntBASIC16.31■□□□□ 0.2
ATXN3P54252 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC16.31■□□□□ 0.2
ATXN3P54252 TEX28P1-201ENST00000613479 1221 ntBASIC16.31■□□□□ 0.2
ATXN3P54252 TEX28P2-201ENST00000617764 1221 ntBASIC16.31■□□□□ 0.2
ATXN3P54252 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATXN3P54252 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATXN3P54252 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATXN3P54252 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
ATXN3P54252 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
ATXN3P54252 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATXN3P54252 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATXN3P54252 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
ATXN3P54252 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms