Protein–RNA interactions for Protein: P52738

ZNF140, Zinc finger protein 140, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF140P52738 AC087481.3-201ENST00000602886 1894 ntBASIC15.78■□□□□ 0.12
ZNF140P52738 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC15.78■□□□□ 0.12
ZNF140P52738 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
ZNF140P52738 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
ZNF140P52738 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
ZNF140P52738 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ZNF140P52738 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
ZNF140P52738 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
ZNF140P52738 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
ZNF140P52738 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
ZNF140P52738 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
ZNF140P52738 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
ZNF140P52738 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC15.77■□□□□ 0.12
ZNF140P52738 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
ZNF140P52738 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
ZNF140P52738 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
ZNF140P52738 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC15.77■□□□□ 0.12
ZNF140P52738 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC15.77■□□□□ 0.12
ZNF140P52738 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
ZNF140P52738 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC15.77■□□□□ 0.12
ZNF140P52738 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC15.77■□□□□ 0.12
ZNF140P52738 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
ZNF140P52738 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
ZNF140P52738 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
ZNF140P52738 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
ZNF140P52738 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
ZNF140P52738 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
ZNF140P52738 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
ZNF140P52738 HNRNPA3P1-201ENST00000401429 1139 ntBASIC15.77■□□□□ 0.12
ZNF140P52738 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
ZNF140P52738 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC15.77■□□□□ 0.12
ZNF140P52738 PMS2P2-201ENST00000425039 1128 ntBASIC15.77■□□□□ 0.12
ZNF140P52738 AC055876.3-201ENST00000431496 288 ntBASIC15.77■□□□□ 0.12
ZNF140P52738 RPL13P2-201ENST00000440687 659 ntBASIC15.77■□□□□ 0.12
ZNF140P52738 HNRNPA3P5-201ENST00000455201 833 ntBASIC15.77■□□□□ 0.12
ZNF140P52738 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC15.77■□□□□ 0.12
ZNF140P52738 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC15.77■□□□□ 0.12
ZNF140P52738 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC15.77■□□□□ 0.12
ZNF140P52738 SLED1-202ENST00000512051 380 ntBASIC15.77■□□□□ 0.12
ZNF140P52738 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC15.77■□□□□ 0.12
ZNF140P52738 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC15.77■□□□□ 0.12
ZNF140P52738 RFPL4AP1-201ENST00000530883 850 ntBASIC15.77■□□□□ 0.12
ZNF140P52738 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
ZNF140P52738 CMC2-214ENST00000565925 640 ntTSL 5 BASIC15.77■□□□□ 0.12
ZNF140P52738 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC15.77■□□□□ 0.12
ZNF140P52738 AL390955.2-201ENST00000603032 514 ntBASIC15.77■□□□□ 0.12
ZNF140P52738 AC138649.4-201ENST00000612222 287 ntBASIC15.77■□□□□ 0.12
ZNF140P52738 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
ZNF140P52738 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
ZNF140P52738 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC15.77■□□□□ 0.11
ZNF140P52738 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.11
ZNF140P52738 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.11
ZNF140P52738 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
ZNF140P52738 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC15.77■□□□□ 0.11
ZNF140P52738 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC15.77■□□□□ 0.11
ZNF140P52738 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
ZNF140P52738 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
ZNF140P52738 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
ZNF140P52738 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC15.77■□□□□ 0.11
ZNF140P52738 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
ZNF140P52738 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
ZNF140P52738 GSN-206ENST00000394353 2311 ntTSL 2 BASIC15.77■□□□□ 0.11
ZNF140P52738 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
ZNF140P52738 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
ZNF140P52738 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC15.77■□□□□ 0.11
ZNF140P52738 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ZNF140P52738 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
ZNF140P52738 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ZNF140P52738 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ZNF140P52738 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC15.76■□□□□ 0.11
ZNF140P52738 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
ZNF140P52738 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ZNF140P52738 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
ZNF140P52738 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC15.76■□□□□ 0.11
ZNF140P52738 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ZNF140P52738 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
ZNF140P52738 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC15.76■□□□□ 0.11
ZNF140P52738 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
ZNF140P52738 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
ZNF140P52738 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
ZNF140P52738 AC073347.1-201ENST00000421633 2643 ntBASIC15.76■□□□□ 0.11
ZNF140P52738 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
ZNF140P52738 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ZNF140P52738 VMA21-202ENST00000370361 693 ntTSL 5 BASIC15.76■□□□□ 0.11
ZNF140P52738 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
ZNF140P52738 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC15.76■□□□□ 0.11
ZNF140P52738 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC15.76■□□□□ 0.11
ZNF140P52738 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC15.76■□□□□ 0.11
ZNF140P52738 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC15.76■□□□□ 0.11
ZNF140P52738 IGHV3-42-201ENST00000520410 361 ntBASIC15.76■□□□□ 0.11
ZNF140P52738 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC15.76■□□□□ 0.11
ZNF140P52738 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC15.76■□□□□ 0.11
ZNF140P52738 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC15.76■□□□□ 0.11
ZNF140P52738 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC15.76■□□□□ 0.11
ZNF140P52738 AC074044.1-201ENST00000609673 707 ntBASIC15.76■□□□□ 0.11
ZNF140P52738 AL109936.8-201ENST00000641772 604 ntBASIC15.76■□□□□ 0.11
ZNF140P52738 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC15.76■□□□□ 0.11
ZNF140P52738 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
ZNF140P52738 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ZNF140P52738 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms