Protein–RNA interactions for Protein: P51160

PDE6C, Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha', humanhuman

Predictions only

Length 858 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6CP51160 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC17.23■□□□□ 0.35
PDE6CP51160 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
PDE6CP51160 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
PDE6CP51160 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PDE6CP51160 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC17.23■□□□□ 0.35
PDE6CP51160 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
PDE6CP51160 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PDE6CP51160 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PDE6CP51160 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC17.23■□□□□ 0.35
PDE6CP51160 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
PDE6CP51160 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC17.23■□□□□ 0.35
PDE6CP51160 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PDE6CP51160 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PDE6CP51160 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PDE6CP51160 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
PDE6CP51160 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC17.22■□□□□ 0.35
PDE6CP51160 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
PDE6CP51160 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PDE6CP51160 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PDE6CP51160 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PDE6CP51160 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC17.22■□□□□ 0.35
PDE6CP51160 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC17.22■□□□□ 0.35
PDE6CP51160 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PDE6CP51160 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PDE6CP51160 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PDE6CP51160 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PDE6CP51160 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PDE6CP51160 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PDE6CP51160 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PDE6CP51160 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC17.22■□□□□ 0.35
PDE6CP51160 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PDE6CP51160 MBP-202ENST00000355994 2772 ntTSL 5 BASIC17.22■□□□□ 0.35
PDE6CP51160 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PDE6CP51160 AC092384.3-202ENST00000564646 2873 ntBASIC17.22■□□□□ 0.35
PDE6CP51160 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PDE6CP51160 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PDE6CP51160 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PDE6CP51160 INGX-202ENST00000489074 768 ntBASIC17.22■□□□□ 0.35
PDE6CP51160 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
PDE6CP51160 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PDE6CP51160 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PDE6CP51160 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC17.22■□□□□ 0.35
PDE6CP51160 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC17.22■□□□□ 0.35
PDE6CP51160 AC243562.2-201ENST00000561247 970 ntBASIC17.22■□□□□ 0.35
PDE6CP51160 AC018529.1-201ENST00000613063 361 ntBASIC17.22■□□□□ 0.35
PDE6CP51160 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PDE6CP51160 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC17.22■□□□□ 0.35
PDE6CP51160 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PDE6CP51160 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PDE6CP51160 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
PDE6CP51160 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PDE6CP51160 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PDE6CP51160 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC17.22■□□□□ 0.35
PDE6CP51160 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
PDE6CP51160 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PDE6CP51160 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PDE6CP51160 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PDE6CP51160 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
PDE6CP51160 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
PDE6CP51160 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
PDE6CP51160 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
PDE6CP51160 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PDE6CP51160 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
PDE6CP51160 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
PDE6CP51160 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PDE6CP51160 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
PDE6CP51160 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PDE6CP51160 AC068587.6-202ENST00000641839 5619 ntBASIC17.21■□□□□ 0.35
PDE6CP51160 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PDE6CP51160 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
PDE6CP51160 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PDE6CP51160 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
PDE6CP51160 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PDE6CP51160 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC17.21■□□□□ 0.35
PDE6CP51160 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
PDE6CP51160 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC17.21■□□□□ 0.35
PDE6CP51160 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC17.21■□□□□ 0.35
PDE6CP51160 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC17.21■□□□□ 0.35
PDE6CP51160 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC17.21■□□□□ 0.35
PDE6CP51160 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC17.21■□□□□ 0.35
PDE6CP51160 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC17.21■□□□□ 0.35
PDE6CP51160 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC17.21■□□□□ 0.35
PDE6CP51160 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC17.21■□□□□ 0.35
PDE6CP51160 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC17.21■□□□□ 0.35
PDE6CP51160 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC17.21■□□□□ 0.35
PDE6CP51160 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC17.21■□□□□ 0.35
PDE6CP51160 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC17.21■□□□□ 0.35
PDE6CP51160 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PDE6CP51160 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PDE6CP51160 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PDE6CP51160 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
PDE6CP51160 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PDE6CP51160 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
PDE6CP51160 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC17.21■□□□□ 0.34
PDE6CP51160 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC17.21■□□□□ 0.34
PDE6CP51160 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
PDE6CP51160 AC063926.3-201ENST00000624734 5658 ntBASIC17.21■□□□□ 0.34
PDE6CP51160 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PDE6CP51160 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC17.2■□□□□ 0.34
PDE6CP51160 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 62.1 ms