Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 RN7SL725P-201ENST00000606439 259 ntBASIC17.58■□□□□ 0.41
CENPFP49454 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC17.58■□□□□ 0.41
CENPFP49454 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.58■□□□□ 0.4
CENPFP49454 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CENPFP49454 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CENPFP49454 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CENPFP49454 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
CENPFP49454 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CENPFP49454 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
CENPFP49454 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CENPFP49454 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CENPFP49454 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
CENPFP49454 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
CENPFP49454 USP40-206ENST00000443711 628 ntTSL 2 BASIC17.58■□□□□ 0.4
CENPFP49454 AC012618.1-201ENST00000461223 412 ntBASIC17.58■□□□□ 0.4
CENPFP49454 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC17.58■□□□□ 0.4
CENPFP49454 MEF2C-AS2-201ENST00000510274 463 ntTSL 5 BASIC17.58■□□□□ 0.4
CENPFP49454 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CENPFP49454 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC17.58■□□□□ 0.4
CENPFP49454 AP001065.2-201ENST00000617205 644 ntBASIC17.58■□□□□ 0.4
CENPFP49454 CASP16P-204ENST00000635032 809 ntBASIC17.58■□□□□ 0.4
CENPFP49454 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
CENPFP49454 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC17.58■□□□□ 0.4
CENPFP49454 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CENPFP49454 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CENPFP49454 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CENPFP49454 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CENPFP49454 MPV17-205ENST00000402310 906 ntTSL 5 BASIC17.57■□□□□ 0.4
CENPFP49454 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CENPFP49454 NPM1P43-201ENST00000558669 786 ntBASIC17.57■□□□□ 0.4
CENPFP49454 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC17.57■□□□□ 0.4
CENPFP49454 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC17.57■□□□□ 0.4
CENPFP49454 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC17.57■□□□□ 0.4
CENPFP49454 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CENPFP49454 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CENPFP49454 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CENPFP49454 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CENPFP49454 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CENPFP49454 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CENPFP49454 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CENPFP49454 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC17.57■□□□□ 0.4
CENPFP49454 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CENPFP49454 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC17.57■□□□□ 0.4
CENPFP49454 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CENPFP49454 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CENPFP49454 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CENPFP49454 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CENPFP49454 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CENPFP49454 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CENPFP49454 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.57■□□□□ 0.4
CENPFP49454 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CENPFP49454 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CENPFP49454 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CENPFP49454 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC17.57■□□□□ 0.4
CENPFP49454 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC17.57■□□□□ 0.4
CENPFP49454 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CENPFP49454 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CENPFP49454 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.56■□□□□ 0.4
CENPFP49454 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
CENPFP49454 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CENPFP49454 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC17.56■□□□□ 0.4
CENPFP49454 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CENPFP49454 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC17.56■□□□□ 0.4
CENPFP49454 Z97180.1-201ENST00000445173 988 ntBASIC17.56■□□□□ 0.4
CENPFP49454 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
CENPFP49454 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
CENPFP49454 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CENPFP49454 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
CENPFP49454 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
CENPFP49454 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CENPFP49454 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CENPFP49454 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
CENPFP49454 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CENPFP49454 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CENPFP49454 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
CENPFP49454 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC17.56■□□□□ 0.4
CENPFP49454 PPY2P-201ENST00000582808 702 ntBASIC17.56■□□□□ 0.4
CENPFP49454 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CENPFP49454 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC17.56■□□□□ 0.4
CENPFP49454 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CENPFP49454 AP005019.2-201ENST00000615104 511 ntBASIC17.56■□□□□ 0.4
CENPFP49454 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC17.56■□□□□ 0.4
CENPFP49454 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC17.56■□□□□ 0.4
CENPFP49454 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC17.56■□□□□ 0.4
CENPFP49454 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
CENPFP49454 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
CENPFP49454 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CENPFP49454 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CENPFP49454 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CENPFP49454 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CENPFP49454 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC17.55■□□□□ 0.4
CENPFP49454 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CENPFP49454 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CENPFP49454 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CENPFP49454 IFI35-203ENST00000415816 1241 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
CENPFP49454 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC17.55■□□□□ 0.4
CENPFP49454 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CENPFP49454 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
CENPFP49454 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CENPFP49454 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms