Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
BRCC3P46736 AC099398.1-201ENST00000567919 2776 ntBASIC16.83■□□□□ 0.29
BRCC3P46736 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
BRCC3P46736 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.29
BRCC3P46736 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
BRCC3P46736 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
BRCC3P46736 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.83■□□□□ 0.28
BRCC3P46736 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
BRCC3P46736 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
BRCC3P46736 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
BRCC3P46736 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
BRCC3P46736 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
BRCC3P46736 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
BRCC3P46736 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC16.83■□□□□ 0.28
BRCC3P46736 AC007274.1-201ENST00000439805 662 ntBASIC16.83■□□□□ 0.28
BRCC3P46736 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC16.83■□□□□ 0.28
BRCC3P46736 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC16.83■□□□□ 0.28
BRCC3P46736 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC16.83■□□□□ 0.28
BRCC3P46736 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
BRCC3P46736 AL121723.1-201ENST00000445194 1519 ntBASIC16.83■□□□□ 0.28
BRCC3P46736 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
BRCC3P46736 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC16.83■□□□□ 0.28
BRCC3P46736 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
BRCC3P46736 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
BRCC3P46736 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
BRCC3P46736 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC16.83■□□□□ 0.28
BRCC3P46736 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC16.83■□□□□ 0.28
BRCC3P46736 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC16.83■□□□□ 0.28
BRCC3P46736 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
BRCC3P46736 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
BRCC3P46736 AL359881.2-201ENST00000602973 570 ntBASIC16.83■□□□□ 0.28
BRCC3P46736 AC133539.2-201ENST00000604757 467 ntBASIC16.83■□□□□ 0.28
BRCC3P46736 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.83■□□□□ 0.28
BRCC3P46736 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.83■□□□□ 0.28
BRCC3P46736 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
BRCC3P46736 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
BRCC3P46736 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
BRCC3P46736 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
BRCC3P46736 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
BRCC3P46736 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
BRCC3P46736 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
BRCC3P46736 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
BRCC3P46736 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
BRCC3P46736 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
BRCC3P46736 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.82■□□□□ 0.28
BRCC3P46736 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
BRCC3P46736 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.82■□□□□ 0.28
BRCC3P46736 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
BRCC3P46736 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
BRCC3P46736 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
BRCC3P46736 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC16.82■□□□□ 0.28
BRCC3P46736 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
BRCC3P46736 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
BRCC3P46736 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.82■□□□□ 0.28
BRCC3P46736 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.82■□□□□ 0.28
BRCC3P46736 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
BRCC3P46736 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
BRCC3P46736 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
BRCC3P46736 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC16.82■□□□□ 0.28
BRCC3P46736 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC16.82■□□□□ 0.28
BRCC3P46736 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC16.82■□□□□ 0.28
BRCC3P46736 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC16.82■□□□□ 0.28
BRCC3P46736 CMC2-214ENST00000565925 640 ntTSL 5 BASIC16.82■□□□□ 0.28
BRCC3P46736 APOC4-201ENST00000591600 348 ntTSL 3 BASIC16.82■□□□□ 0.28
BRCC3P46736 AL049840.4-201ENST00000602422 811 ntBASIC16.82■□□□□ 0.28
BRCC3P46736 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC16.82■□□□□ 0.28
BRCC3P46736 CU634019.7-201ENST00000624153 1185 ntBASIC16.82■□□□□ 0.28
BRCC3P46736 FP236241.2-201ENST00000624906 1185 ntBASIC16.82■□□□□ 0.28
BRCC3P46736 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
BRCC3P46736 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
BRCC3P46736 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
BRCC3P46736 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.82■□□□□ 0.28
BRCC3P46736 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
BRCC3P46736 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
BRCC3P46736 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
BRCC3P46736 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
BRCC3P46736 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.82■□□□□ 0.28
BRCC3P46736 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
BRCC3P46736 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
BRCC3P46736 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
BRCC3P46736 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
BRCC3P46736 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
BRCC3P46736 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
BRCC3P46736 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
BRCC3P46736 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
BRCC3P46736 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
BRCC3P46736 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
BRCC3P46736 FLII-221ENST00000578558 2377 ntTSL 5 BASIC16.81■□□□□ 0.28
BRCC3P46736 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.81■□□□□ 0.28
BRCC3P46736 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
BRCC3P46736 KRT8P22-201ENST00000562317 1415 ntBASIC16.81■□□□□ 0.28
BRCC3P46736 LINC02447-202ENST00000501888 2146 ntBASIC16.81■□□□□ 0.28
BRCC3P46736 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.81■□□□□ 0.28
BRCC3P46736 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.81■□□□□ 0.28
BRCC3P46736 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
BRCC3P46736 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
BRCC3P46736 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
BRCC3P46736 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
BRCC3P46736 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
BRCC3P46736 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms