Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
KRT20P35900 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
KRT20P35900 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC15.22■□□□□ 0.03
KRT20P35900 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
KRT20P35900 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
KRT20P35900 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
KRT20P35900 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
KRT20P35900 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
KRT20P35900 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
KRT20P35900 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC15.21■□□□□ 0.03
KRT20P35900 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
KRT20P35900 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
KRT20P35900 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
KRT20P35900 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
KRT20P35900 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC15.21■□□□□ 0.03
KRT20P35900 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
KRT20P35900 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
KRT20P35900 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
KRT20P35900 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC15.21■□□□□ 0.03
KRT20P35900 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
KRT20P35900 PRYP6-201ENST00000514804 343 ntBASIC15.21■□□□□ 0.03
KRT20P35900 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC15.21■□□□□ 0.03
KRT20P35900 MIR4469-201ENST00000583919 79 ntBASIC15.21■□□□□ 0.03
KRT20P35900 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC15.21■□□□□ 0.03
KRT20P35900 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC15.21■□□□□ 0.03
KRT20P35900 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
KRT20P35900 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC15.21■□□□□ 0.03
KRT20P35900 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
KRT20P35900 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
KRT20P35900 ACE-203ENST00000413513 2237 ntTSL 2 BASIC15.21■□□□□ 0.03
KRT20P35900 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
KRT20P35900 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
KRT20P35900 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
KRT20P35900 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
KRT20P35900 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
KRT20P35900 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
KRT20P35900 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC15.21■□□□□ 0.02
KRT20P35900 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
KRT20P35900 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
KRT20P35900 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
KRT20P35900 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
KRT20P35900 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
KRT20P35900 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
KRT20P35900 LINC02447-202ENST00000501888 2146 ntBASIC15.2■□□□□ 0.02
KRT20P35900 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC15.2■□□□□ 0.02
KRT20P35900 CDC14C-201ENST00000428251 1719 ntBASIC15.2■□□□□ 0.02
KRT20P35900 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
KRT20P35900 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
KRT20P35900 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
KRT20P35900 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC15.2■□□□□ 0.02
KRT20P35900 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC15.2■□□□□ 0.02
KRT20P35900 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
KRT20P35900 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
KRT20P35900 AC112504.1-201ENST00000623415 1841 ntBASIC15.2■□□□□ 0.02
KRT20P35900 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
KRT20P35900 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC15.2■□□□□ 0.02
KRT20P35900 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
KRT20P35900 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
KRT20P35900 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC15.2■□□□□ 0.02
KRT20P35900 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
KRT20P35900 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC15.2■□□□□ 0.02
KRT20P35900 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC15.2■□□□□ 0.02
KRT20P35900 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
KRT20P35900 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
KRT20P35900 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC15.2■□□□□ 0.02
KRT20P35900 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
KRT20P35900 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
KRT20P35900 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
KRT20P35900 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC15.2■□□□□ 0.02
KRT20P35900 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC15.2■□□□□ 0.02
KRT20P35900 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC15.2■□□□□ 0.02
KRT20P35900 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC15.2■□□□□ 0.02
KRT20P35900 DHDH-204ENST00000523250 634 ntTSL 5 BASIC15.2■□□□□ 0.02
KRT20P35900 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC15.2■□□□□ 0.02
KRT20P35900 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
KRT20P35900 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC15.2■□□□□ 0.02
KRT20P35900 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC15.2■□□□□ 0.02
KRT20P35900 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
KRT20P35900 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
KRT20P35900 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
KRT20P35900 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
KRT20P35900 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
KRT20P35900 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
KRT20P35900 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
KRT20P35900 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
KRT20P35900 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
KRT20P35900 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC15.2■□□□□ 0.02
KRT20P35900 U82695.1-201ENST00000635752 1889 ntBASIC15.2■□□□□ 0.02
KRT20P35900 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
KRT20P35900 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC15.2■□□□□ 0.02
KRT20P35900 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
KRT20P35900 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC15.2■□□□□ 0.02
KRT20P35900 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
KRT20P35900 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
KRT20P35900 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
KRT20P35900 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
KRT20P35900 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
KRT20P35900 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
KRT20P35900 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
KRT20P35900 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms