Protein–RNA interactions for Protein: P35712

SOX6, Transcription factor SOX-6, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6P35712 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SOX6P35712 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SOX6P35712 LINC00982-205ENST00000420957 435 ntBASIC14.35□□□□□ -0.11
SOX6P35712 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
SOX6P35712 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC14.35□□□□□ -0.11
SOX6P35712 BX276092.5-203ENST00000456199 560 ntBASIC14.35□□□□□ -0.11
SOX6P35712 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SOX6P35712 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC14.35□□□□□ -0.11
SOX6P35712 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC14.35□□□□□ -0.11
SOX6P35712 PTK2-216ENST00000519881 863 ntTSL 3 BASIC14.35□□□□□ -0.11
SOX6P35712 RNF126P1-202ENST00000569893 925 ntBASIC14.35□□□□□ -0.11
SOX6P35712 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
SOX6P35712 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
SOX6P35712 AC116407.4-201ENST00000623319 1061 ntBASIC14.35□□□□□ -0.11
SOX6P35712 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
SOX6P35712 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SOX6P35712 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SOX6P35712 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SOX6P35712 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SOX6P35712 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC14.35□□□□□ -0.11
SOX6P35712 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SOX6P35712 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SOX6P35712 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC14.35□□□□□ -0.11
SOX6P35712 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC14.35□□□□□ -0.11
SOX6P35712 PEG13-201ENST00000631594 5667 ntBASIC14.35□□□□□ -0.11
SOX6P35712 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
SOX6P35712 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SOX6P35712 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC14.35□□□□□ -0.11
SOX6P35712 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SOX6P35712 AC131009.4-201ENST00000624048 1740 ntBASIC14.35□□□□□ -0.11
SOX6P35712 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
SOX6P35712 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC14.35□□□□□ -0.11
SOX6P35712 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SOX6P35712 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SOX6P35712 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SOX6P35712 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SOX6P35712 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SOX6P35712 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
SOX6P35712 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC14.34□□□□□ -0.11
SOX6P35712 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SOX6P35712 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SOX6P35712 AC041040.2-201ENST00000622926 2899 ntBASIC14.34□□□□□ -0.11
SOX6P35712 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SOX6P35712 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC14.34□□□□□ -0.11
SOX6P35712 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC14.34□□□□□ -0.11
SOX6P35712 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SOX6P35712 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
SOX6P35712 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SOX6P35712 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC14.34□□□□□ -0.11
SOX6P35712 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SOX6P35712 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SOX6P35712 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SOX6P35712 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC14.34□□□□□ -0.11
SOX6P35712 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SOX6P35712 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC14.34□□□□□ -0.11
SOX6P35712 KRT8P26-201ENST00000534154 1276 ntBASIC14.34□□□□□ -0.11
SOX6P35712 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC14.34□□□□□ -0.11
SOX6P35712 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC14.34□□□□□ -0.11
SOX6P35712 AL121672.3-201ENST00000608644 468 ntBASIC14.34□□□□□ -0.11
SOX6P35712 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
SOX6P35712 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
SOX6P35712 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
SOX6P35712 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SOX6P35712 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SOX6P35712 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC14.34□□□□□ -0.11
SOX6P35712 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
SOX6P35712 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SOX6P35712 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC14.34□□□□□ -0.11
SOX6P35712 UBC-206ENST00000538617 1303 ntTSL 5 BASIC14.34□□□□□ -0.11
SOX6P35712 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SOX6P35712 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SOX6P35712 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SOX6P35712 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC14.34□□□□□ -0.11
SOX6P35712 AJ011931.1-201ENST00000618749 2492 ntBASIC14.34□□□□□ -0.11
SOX6P35712 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC14.34□□□□□ -0.11
SOX6P35712 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SOX6P35712 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SOX6P35712 STK40-201ENST00000359297 4837 ntTSL 2 BASIC14.34□□□□□ -0.11
SOX6P35712 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SOX6P35712 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
SOX6P35712 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SOX6P35712 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
SOX6P35712 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SOX6P35712 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.11
SOX6P35712 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SOX6P35712 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC14.33□□□□□ -0.11
SOX6P35712 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
SOX6P35712 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SOX6P35712 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC14.33□□□□□ -0.12
SOX6P35712 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SOX6P35712 AC117489.1-201ENST00000625169 3217 ntBASIC14.33□□□□□ -0.12
SOX6P35712 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
SOX6P35712 AC148477.4-201ENST00000613430 1793 ntBASIC14.33□□□□□ -0.12
SOX6P35712 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SOX6P35712 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SOX6P35712 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC14.33□□□□□ -0.12
SOX6P35712 HAUS4P1-201ENST00000406739 1145 ntBASIC14.33□□□□□ -0.12
SOX6P35712 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC14.33□□□□□ -0.12
SOX6P35712 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC14.33□□□□□ -0.12
SOX6P35712 S100A2-206ENST00000497140 697 ntTSL 2 BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms