Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CTNNA1P35221 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CTNNA1P35221 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC16.86■□□□□ 0.29
CTNNA1P35221 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC16.86■□□□□ 0.29
CTNNA1P35221 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CTNNA1P35221 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CTNNA1P35221 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CTNNA1P35221 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CTNNA1P35221 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CTNNA1P35221 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CTNNA1P35221 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
CTNNA1P35221 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CTNNA1P35221 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
CTNNA1P35221 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CTNNA1P35221 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.85■□□□□ 0.29
CTNNA1P35221 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CTNNA1P35221 AC002056.1-201ENST00000395613 760 ntBASIC16.85■□□□□ 0.29
CTNNA1P35221 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CTNNA1P35221 LBH-204ENST00000406087 559 ntTSL 4 BASIC16.85■□□□□ 0.29
CTNNA1P35221 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
CTNNA1P35221 AC007967.2-201ENST00000432613 625 ntBASIC16.85■□□□□ 0.29
CTNNA1P35221 AC074386.1-202ENST00000463561 864 ntBASIC16.85■□□□□ 0.29
CTNNA1P35221 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC16.85■□□□□ 0.29
CTNNA1P35221 PP7080-204ENST00000510714 601 ntTSL 3 BASIC16.85■□□□□ 0.29
CTNNA1P35221 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC16.85■□□□□ 0.29
CTNNA1P35221 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CTNNA1P35221 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC16.85■□□□□ 0.29
CTNNA1P35221 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC16.85■□□□□ 0.29
CTNNA1P35221 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CTNNA1P35221 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CTNNA1P35221 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
CTNNA1P35221 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
CTNNA1P35221 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CTNNA1P35221 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC16.85■□□□□ 0.29
CTNNA1P35221 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
CTNNA1P35221 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC16.85■□□□□ 0.29
CTNNA1P35221 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CTNNA1P35221 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CTNNA1P35221 LRRFIP1P1-201ENST00000498774 2246 ntBASIC16.85■□□□□ 0.29
CTNNA1P35221 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CTNNA1P35221 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CTNNA1P35221 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CTNNA1P35221 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CTNNA1P35221 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
CTNNA1P35221 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC16.85■□□□□ 0.29
CTNNA1P35221 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CTNNA1P35221 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CTNNA1P35221 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC16.84■□□□□ 0.29
CTNNA1P35221 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
CTNNA1P35221 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CTNNA1P35221 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC16.84■□□□□ 0.29
CTNNA1P35221 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CTNNA1P35221 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC16.84■□□□□ 0.29
CTNNA1P35221 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CTNNA1P35221 AC087481.3-201ENST00000602886 1894 ntBASIC16.84■□□□□ 0.29
CTNNA1P35221 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC16.84■□□□□ 0.29
CTNNA1P35221 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CTNNA1P35221 AC090616.6-203ENST00000579186 1945 ntBASIC16.84■□□□□ 0.29
CTNNA1P35221 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC16.84■□□□□ 0.29
CTNNA1P35221 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CTNNA1P35221 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
CTNNA1P35221 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC16.84■□□□□ 0.29
CTNNA1P35221 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CTNNA1P35221 C1R-202ENST00000536053 2347 ntTSL 2 BASIC16.84■□□□□ 0.29
CTNNA1P35221 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
CTNNA1P35221 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CTNNA1P35221 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CTNNA1P35221 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
CTNNA1P35221 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CTNNA1P35221 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CTNNA1P35221 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CTNNA1P35221 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CTNNA1P35221 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
CTNNA1P35221 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CTNNA1P35221 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC16.84■□□□□ 0.29
CTNNA1P35221 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC16.84■□□□□ 0.29
CTNNA1P35221 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CTNNA1P35221 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC16.84■□□□□ 0.29
CTNNA1P35221 AL138918.1-201ENST00000568306 659 ntBASIC16.84■□□□□ 0.29
CTNNA1P35221 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC16.84■□□□□ 0.29
CTNNA1P35221 AC061975.2-201ENST00000581722 295 ntBASIC16.84■□□□□ 0.29
CTNNA1P35221 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CTNNA1P35221 AL365209.1-201ENST00000624418 6473 ntBASIC16.84■□□□□ 0.29
CTNNA1P35221 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CTNNA1P35221 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC16.84■□□□□ 0.29
CTNNA1P35221 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CTNNA1P35221 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
CTNNA1P35221 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
CTNNA1P35221 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CTNNA1P35221 FOXO1B-201ENST00000504678 1527 ntBASIC16.84■□□□□ 0.29
CTNNA1P35221 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC16.84■□□□□ 0.29
CTNNA1P35221 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CTNNA1P35221 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CTNNA1P35221 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CTNNA1P35221 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CTNNA1P35221 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CTNNA1P35221 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CTNNA1P35221 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CTNNA1P35221 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CTNNA1P35221 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms