Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 DFFB-212ENST00000625756 649 ntTSL 5 BASIC11.77□□□□□ -0.53
CKS2P33552 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC11.77□□□□□ -0.53
CKS2P33552 AC011477.6-201ENST00000604980 1927 ntBASIC11.77□□□□□ -0.53
CKS2P33552 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CKS2P33552 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
CKS2P33552 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
CKS2P33552 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
CKS2P33552 AC112693.3-201ENST00000624819 1983 ntBASIC11.77□□□□□ -0.53
CKS2P33552 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC11.77□□□□□ -0.53
CKS2P33552 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CKS2P33552 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CKS2P33552 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC11.77□□□□□ -0.53
CKS2P33552 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CKS2P33552 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC11.77□□□□□ -0.53
CKS2P33552 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CKS2P33552 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CKS2P33552 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC11.77□□□□□ -0.53
CKS2P33552 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
CKS2P33552 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
CKS2P33552 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
CKS2P33552 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CKS2P33552 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CKS2P33552 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
CKS2P33552 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC11.77□□□□□ -0.53
CKS2P33552 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC11.76□□□□□ -0.53
CKS2P33552 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CKS2P33552 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC11.76□□□□□ -0.53
CKS2P33552 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
CKS2P33552 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
CKS2P33552 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CKS2P33552 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CKS2P33552 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
CKS2P33552 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CKS2P33552 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
CKS2P33552 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
CKS2P33552 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC11.76□□□□□ -0.53
CKS2P33552 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
CKS2P33552 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CKS2P33552 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC11.76□□□□□ -0.53
CKS2P33552 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC11.76□□□□□ -0.53
CKS2P33552 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
CKS2P33552 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC11.76□□□□□ -0.53
CKS2P33552 AC079776.2-201ENST00000641154 1609 ntBASIC11.76□□□□□ -0.53
CKS2P33552 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
CKS2P33552 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CKS2P33552 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
CKS2P33552 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CKS2P33552 SLC22A20-204ENST00000530038 1673 ntBASIC11.76□□□□□ -0.53
CKS2P33552 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
CKS2P33552 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CKS2P33552 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CKS2P33552 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
CKS2P33552 TLE1-202ENST00000376484 666 ntTSL 3 BASIC11.76□□□□□ -0.53
CKS2P33552 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
CKS2P33552 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
CKS2P33552 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC11.76□□□□□ -0.53
CKS2P33552 AL137013.1-201ENST00000432946 1228 ntBASIC11.76□□□□□ -0.53
CKS2P33552 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
CKS2P33552 SPDYE13P-201ENST00000445314 798 ntBASIC11.76□□□□□ -0.53
CKS2P33552 PAWRP1-201ENST00000451083 565 ntBASIC11.76□□□□□ -0.53
CKS2P33552 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC11.76□□□□□ -0.53
CKS2P33552 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CKS2P33552 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC11.76□□□□□ -0.53
CKS2P33552 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC11.76□□□□□ -0.53
CKS2P33552 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
CKS2P33552 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC11.76□□□□□ -0.53
CKS2P33552 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC11.76□□□□□ -0.53
CKS2P33552 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC11.76□□□□□ -0.53
CKS2P33552 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC11.76□□□□□ -0.53
CKS2P33552 AC073592.4-201ENST00000623827 446 ntBASIC11.76□□□□□ -0.53
CKS2P33552 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC11.76□□□□□ -0.53
CKS2P33552 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC11.76□□□□□ -0.53
CKS2P33552 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC11.76□□□□□ -0.53
CKS2P33552 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
CKS2P33552 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
CKS2P33552 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC11.76□□□□□ -0.53
CKS2P33552 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
CKS2P33552 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
CKS2P33552 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
CKS2P33552 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC11.76□□□□□ -0.53
CKS2P33552 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
CKS2P33552 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC11.76□□□□□ -0.53
CKS2P33552 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC11.76□□□□□ -0.53
CKS2P33552 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC11.76□□□□□ -0.53
CKS2P33552 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CKS2P33552 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC11.76□□□□□ -0.53
CKS2P33552 MIR193BHG-211ENST00000641433 5365 ntBASIC11.76□□□□□ -0.53
CKS2P33552 USP3-204ENST00000540797 5474 ntTSL 2 BASIC11.76□□□□□ -0.53
CKS2P33552 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC11.75□□□□□ -0.53
CKS2P33552 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
CKS2P33552 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
CKS2P33552 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC11.75□□□□□ -0.53
CKS2P33552 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
CKS2P33552 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC11.75□□□□□ -0.53
CKS2P33552 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CKS2P33552 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC11.75□□□□□ -0.53
CKS2P33552 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
CKS2P33552 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
CKS2P33552 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CKS2P33552 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms