Protein–RNA interactions for Protein: P33241

LSP1, Lymphocyte-specific protein 1, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P33241 VENTXP7-201ENST00000475503 772 ntBASIC16.02■□□□□ 0.16
LSP1P33241 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
LSP1P33241 AC022616.7-201ENST00000525383 220 ntBASIC16.02■□□□□ 0.16
LSP1P33241 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC16.02■□□□□ 0.16
LSP1P33241 ABR-204ENST00000543210 1049 ntTSL 2 BASIC16.02■□□□□ 0.16
LSP1P33241 ABR-217ENST00000572441 563 ntTSL 4 BASIC16.02■□□□□ 0.16
LSP1P33241 RMI2-205ENST00000576027 818 ntTSL 2 BASIC16.02■□□□□ 0.16
LSP1P33241 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
LSP1P33241 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
LSP1P33241 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC16.02■□□□□ 0.16
LSP1P33241 AC127383.1-201ENST00000444697 1800 ntBASIC16.02■□□□□ 0.16
LSP1P33241 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
LSP1P33241 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
LSP1P33241 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
LSP1P33241 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
LSP1P33241 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
LSP1P33241 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
LSP1P33241 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC16.02■□□□□ 0.15
LSP1P33241 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
LSP1P33241 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC16.02■□□□□ 0.15
LSP1P33241 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC16.02■□□□□ 0.15
LSP1P33241 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC16.02■□□□□ 0.15
LSP1P33241 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
LSP1P33241 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
LSP1P33241 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC16.02■□□□□ 0.15
LSP1P33241 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LSP1P33241 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LSP1P33241 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LSP1P33241 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LSP1P33241 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LSP1P33241 APP-205ENST00000358918 2366 ntTSL 5 BASIC16.01■□□□□ 0.15
LSP1P33241 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
LSP1P33241 AC097359.2-201ENST00000604992 2389 ntBASIC16.01■□□□□ 0.15
LSP1P33241 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
LSP1P33241 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC16.01■□□□□ 0.15
LSP1P33241 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LSP1P33241 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LSP1P33241 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
LSP1P33241 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
LSP1P33241 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LSP1P33241 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
LSP1P33241 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LSP1P33241 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
LSP1P33241 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LSP1P33241 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
LSP1P33241 LRRFIP1P1-201ENST00000498774 2246 ntBASIC16.01■□□□□ 0.15
LSP1P33241 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LSP1P33241 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LSP1P33241 FAM8A3P-201ENST00000427218 844 ntBASIC16.01■□□□□ 0.15
LSP1P33241 AC104076.2-201ENST00000448912 469 ntBASIC16.01■□□□□ 0.15
LSP1P33241 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LSP1P33241 AC063952.2-201ENST00000498792 1227 ntBASIC16.01■□□□□ 0.15
LSP1P33241 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC16.01■□□□□ 0.15
LSP1P33241 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC16.01■□□□□ 0.15
LSP1P33241 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LSP1P33241 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LSP1P33241 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC16.01■□□□□ 0.15
LSP1P33241 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LSP1P33241 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LSP1P33241 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC16.01■□□□□ 0.15
LSP1P33241 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LSP1P33241 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC16.01■□□□□ 0.15
LSP1P33241 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LSP1P33241 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
LSP1P33241 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LSP1P33241 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC16.01■□□□□ 0.15
LSP1P33241 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC16.01■□□□□ 0.15
LSP1P33241 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
LSP1P33241 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
LSP1P33241 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC16.01■□□□□ 0.15
LSP1P33241 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LSP1P33241 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LSP1P33241 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC16.01■□□□□ 0.15
LSP1P33241 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
LSP1P33241 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LSP1P33241 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LSP1P33241 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LSP1P33241 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LSP1P33241 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LSP1P33241 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC16■□□□□ 0.15
LSP1P33241 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC16■□□□□ 0.15
LSP1P33241 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC16■□□□□ 0.15
LSP1P33241 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LSP1P33241 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC16■□□□□ 0.15
LSP1P33241 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LSP1P33241 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LSP1P33241 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LSP1P33241 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC16■□□□□ 0.15
LSP1P33241 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC16■□□□□ 0.15
LSP1P33241 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC16■□□□□ 0.15
LSP1P33241 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LSP1P33241 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
LSP1P33241 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC16■□□□□ 0.15
LSP1P33241 VMO1-203ENST00000416307 712 ntTSL 2 BASIC16■□□□□ 0.15
LSP1P33241 LTBR-211ENST00000543190 785 ntTSL 3 BASIC16■□□□□ 0.15
LSP1P33241 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC16■□□□□ 0.15
LSP1P33241 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC16■□□□□ 0.15
LSP1P33241 NME3-204ENST00000563498 920 ntTSL 2 BASIC16■□□□□ 0.15
LSP1P33241 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC16■□□□□ 0.15
LSP1P33241 RBM42-202ENST00000586618 771 ntTSL 3 BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms