Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
ABCD3P28288 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
ABCD3P28288 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
ABCD3P28288 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14.66□□□□□ -0.06
ABCD3P28288 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ABCD3P28288 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC14.66□□□□□ -0.06
ABCD3P28288 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC14.66□□□□□ -0.06
ABCD3P28288 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ABCD3P28288 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ABCD3P28288 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ABCD3P28288 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
ABCD3P28288 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ABCD3P28288 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC14.66□□□□□ -0.06
ABCD3P28288 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
ABCD3P28288 AGK-211ENST00000629555 2765 ntTSL 5 BASIC14.66□□□□□ -0.06
ABCD3P28288 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
ABCD3P28288 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
ABCD3P28288 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
ABCD3P28288 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC14.66□□□□□ -0.06
ABCD3P28288 VILL-207ENST00000465644 1857 ntTSL 5 BASIC14.66□□□□□ -0.06
ABCD3P28288 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
ABCD3P28288 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
ABCD3P28288 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
ABCD3P28288 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
ABCD3P28288 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
ABCD3P28288 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
ABCD3P28288 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC14.66□□□□□ -0.06
ABCD3P28288 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC14.66□□□□□ -0.06
ABCD3P28288 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC14.66□□□□□ -0.06
ABCD3P28288 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC14.66□□□□□ -0.06
ABCD3P28288 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC14.66□□□□□ -0.06
ABCD3P28288 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC14.66□□□□□ -0.06
ABCD3P28288 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC14.66□□□□□ -0.06
ABCD3P28288 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
ABCD3P28288 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC14.66□□□□□ -0.06
ABCD3P28288 SPCS2P1-201ENST00000561636 679 ntBASIC14.66□□□□□ -0.06
ABCD3P28288 AC025048.3-201ENST00000590609 569 ntBASIC14.66□□□□□ -0.06
ABCD3P28288 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
ABCD3P28288 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
ABCD3P28288 AL096865.1-201ENST00000606796 927 ntBASIC14.66□□□□□ -0.06
ABCD3P28288 AC005702.4-201ENST00000618393 416 ntBASIC14.66□□□□□ -0.06
ABCD3P28288 AJ011932.1-201ENST00000621707 465 ntBASIC14.66□□□□□ -0.06
ABCD3P28288 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
ABCD3P28288 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
ABCD3P28288 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
ABCD3P28288 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ABCD3P28288 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
ABCD3P28288 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC14.66□□□□□ -0.06
ABCD3P28288 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ABCD3P28288 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
ABCD3P28288 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC14.66□□□□□ -0.06
ABCD3P28288 GRN-214ENST00000589265 1632 ntTSL 5 BASIC14.66□□□□□ -0.06
ABCD3P28288 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ABCD3P28288 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC14.66□□□□□ -0.06
ABCD3P28288 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
ABCD3P28288 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC14.66□□□□□ -0.06
ABCD3P28288 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
ABCD3P28288 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
ABCD3P28288 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ABCD3P28288 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ABCD3P28288 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
ABCD3P28288 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC14.65□□□□□ -0.06
ABCD3P28288 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ABCD3P28288 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC14.65□□□□□ -0.06
ABCD3P28288 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC14.65□□□□□ -0.06
ABCD3P28288 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
ABCD3P28288 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ABCD3P28288 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
ABCD3P28288 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ABCD3P28288 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ABCD3P28288 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ABCD3P28288 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
ABCD3P28288 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
ABCD3P28288 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ABCD3P28288 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
ABCD3P28288 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC14.65□□□□□ -0.06
ABCD3P28288 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC14.65□□□□□ -0.06
ABCD3P28288 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC14.65□□□□□ -0.06
ABCD3P28288 BCRP1-201ENST00000444246 691 ntBASIC14.65□□□□□ -0.06
ABCD3P28288 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
ABCD3P28288 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC14.65□□□□□ -0.06
ABCD3P28288 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC14.65□□□□□ -0.06
ABCD3P28288 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC14.65□□□□□ -0.06
ABCD3P28288 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC14.65□□□□□ -0.06
ABCD3P28288 SDHAP3-202ENST00000515467 728 ntBASIC14.65□□□□□ -0.06
ABCD3P28288 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC14.65□□□□□ -0.06
ABCD3P28288 HNRNPUP1-201ENST00000554987 333 ntBASIC14.65□□□□□ -0.06
ABCD3P28288 AC044860.1-202ENST00000559481 777 ntBASIC14.65□□□□□ -0.06
ABCD3P28288 AC009407.1-201ENST00000568958 598 ntBASIC14.65□□□□□ -0.06
ABCD3P28288 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
ABCD3P28288 AL109936.8-201ENST00000641772 604 ntBASIC14.65□□□□□ -0.06
ABCD3P28288 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC14.65□□□□□ -0.06
ABCD3P28288 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ABCD3P28288 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC14.65□□□□□ -0.06
ABCD3P28288 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC14.65□□□□□ -0.06
ABCD3P28288 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC14.65□□□□□ -0.06
ABCD3P28288 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC14.65□□□□□ -0.06
ABCD3P28288 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC14.65□□□□□ -0.06
ABCD3P28288 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC14.65□□□□□ -0.06
ABCD3P28288 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms