Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 AC073347.1-201ENST00000421633 2643 ntBASIC15.73■□□□□ 0.11
VARSP26640 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC15.73■□□□□ 0.11
VARSP26640 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
VARSP26640 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC15.73■□□□□ 0.11
VARSP26640 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
VARSP26640 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
VARSP26640 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
VARSP26640 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
VARSP26640 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
VARSP26640 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
VARSP26640 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
VARSP26640 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC15.72■□□□□ 0.11
VARSP26640 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
VARSP26640 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
VARSP26640 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
VARSP26640 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
VARSP26640 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
VARSP26640 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC15.72■□□□□ 0.11
VARSP26640 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC15.72■□□□□ 0.11
VARSP26640 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
VARSP26640 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
VARSP26640 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
VARSP26640 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
VARSP26640 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
VARSP26640 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
VARSP26640 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
VARSP26640 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC15.72■□□□□ 0.11
VARSP26640 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
VARSP26640 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
VARSP26640 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
VARSP26640 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
VARSP26640 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC15.72■□□□□ 0.11
VARSP26640 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC15.72■□□□□ 0.11
VARSP26640 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
VARSP26640 AC023141.5-201ENST00000458585 616 ntBASIC15.72■□□□□ 0.11
VARSP26640 AC079140.1-201ENST00000508039 487 ntBASIC15.72■□□□□ 0.11
VARSP26640 GATB-205ENST00000508611 605 ntTSL 2 BASIC15.72■□□□□ 0.11
VARSP26640 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC15.72■□□□□ 0.11
VARSP26640 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC15.72■□□□□ 0.11
VARSP26640 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC15.72■□□□□ 0.11
VARSP26640 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC15.72■□□□□ 0.11
VARSP26640 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC15.72■□□□□ 0.11
VARSP26640 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC15.72■□□□□ 0.11
VARSP26640 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC15.72■□□□□ 0.11
VARSP26640 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC15.72■□□□□ 0.11
VARSP26640 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC15.72■□□□□ 0.11
VARSP26640 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
VARSP26640 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
VARSP26640 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
VARSP26640 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
VARSP26640 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
VARSP26640 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
VARSP26640 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC15.72■□□□□ 0.11
VARSP26640 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
VARSP26640 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC15.72■□□□□ 0.11
VARSP26640 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC15.72■□□□□ 0.11
VARSP26640 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
VARSP26640 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
VARSP26640 FOXO1B-201ENST00000504678 1527 ntBASIC15.72■□□□□ 0.11
VARSP26640 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC15.72■□□□□ 0.11
VARSP26640 GOLGA6L17P-202ENST00000614358 1398 ntBASIC15.72■□□□□ 0.11
VARSP26640 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
VARSP26640 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
VARSP26640 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
VARSP26640 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
VARSP26640 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
VARSP26640 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
VARSP26640 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
VARSP26640 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
VARSP26640 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
VARSP26640 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
VARSP26640 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
VARSP26640 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
VARSP26640 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
VARSP26640 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC15.71■□□□□ 0.11
VARSP26640 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
VARSP26640 GOLGA2P9-201ENST00000596977 1937 ntBASIC15.71■□□□□ 0.11
VARSP26640 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
VARSP26640 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC15.71■□□□□ 0.11
VARSP26640 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
VARSP26640 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
VARSP26640 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC15.71■□□□□ 0.11
VARSP26640 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC15.71■□□□□ 0.11
VARSP26640 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC15.71■□□□□ 0.11
VARSP26640 SPCS2P4-201ENST00000436160 681 ntBASIC15.71■□□□□ 0.11
VARSP26640 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC15.71■□□□□ 0.11
VARSP26640 RN7SL589P-201ENST00000481268 310 ntBASIC15.71■□□□□ 0.11
VARSP26640 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
VARSP26640 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
VARSP26640 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC15.71■□□□□ 0.11
VARSP26640 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC15.71■□□□□ 0.11
VARSP26640 AC073389.1-201ENST00000595595 795 ntBASIC15.71■□□□□ 0.11
VARSP26640 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC15.71■□□□□ 0.11
VARSP26640 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC15.71■□□□□ 0.11
VARSP26640 AC093512.1-201ENST00000617969 520 ntBASIC15.71■□□□□ 0.11
VARSP26640 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC15.71■□□□□ 0.11
VARSP26640 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC15.71■□□□□ 0.11
VARSP26640 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
VARSP26640 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
VARSP26640 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms