Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
NFKB1P19838 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
NFKB1P19838 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NFKB1P19838 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NFKB1P19838 IMPDH1P4-201ENST00000445028 1534 ntBASIC16.18■□□□□ 0.18
NFKB1P19838 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NFKB1P19838 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NFKB1P19838 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC16.18■□□□□ 0.18
NFKB1P19838 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC16.18■□□□□ 0.18
NFKB1P19838 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NFKB1P19838 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC16.18■□□□□ 0.18
NFKB1P19838 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC16.18■□□□□ 0.18
NFKB1P19838 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NFKB1P19838 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NFKB1P19838 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NFKB1P19838 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NFKB1P19838 PPT1-215ENST00000641471 2368 ntBASIC16.18■□□□□ 0.18
NFKB1P19838 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NFKB1P19838 SSR4P1-203ENST00000599569 2260 ntBASIC16.17■□□□□ 0.18
NFKB1P19838 AC009090.5-201ENST00000624886 2285 ntBASIC16.17■□□□□ 0.18
NFKB1P19838 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NFKB1P19838 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
NFKB1P19838 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NFKB1P19838 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
NFKB1P19838 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NFKB1P19838 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
NFKB1P19838 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NFKB1P19838 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NFKB1P19838 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NFKB1P19838 AC105250.1-201ENST00000509378 2057 ntBASIC16.17■□□□□ 0.18
NFKB1P19838 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
NFKB1P19838 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NFKB1P19838 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC16.17■□□□□ 0.18
NFKB1P19838 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
NFKB1P19838 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
NFKB1P19838 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NFKB1P19838 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NFKB1P19838 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC16.17■□□□□ 0.18
NFKB1P19838 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NFKB1P19838 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
NFKB1P19838 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NFKB1P19838 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
NFKB1P19838 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
NFKB1P19838 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NFKB1P19838 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NFKB1P19838 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
NFKB1P19838 HNRNPFP1-201ENST00000391730 1133 ntBASIC16.17■□□□□ 0.18
NFKB1P19838 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC16.17■□□□□ 0.18
NFKB1P19838 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC16.17■□□□□ 0.18
NFKB1P19838 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC16.17■□□□□ 0.18
NFKB1P19838 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC16.17■□□□□ 0.18
NFKB1P19838 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC16.17■□□□□ 0.18
NFKB1P19838 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NFKB1P19838 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NFKB1P19838 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
NFKB1P19838 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC16.17■□□□□ 0.18
NFKB1P19838 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
NFKB1P19838 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC16.17■□□□□ 0.18
NFKB1P19838 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NFKB1P19838 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC16.17■□□□□ 0.18
NFKB1P19838 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NFKB1P19838 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NFKB1P19838 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.17■□□□□ 0.18
NFKB1P19838 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC16.17■□□□□ 0.18
NFKB1P19838 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NFKB1P19838 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
NFKB1P19838 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.17■□□□□ 0.18
NFKB1P19838 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC16.17■□□□□ 0.18
NFKB1P19838 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NFKB1P19838 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC16.17■□□□□ 0.18
NFKB1P19838 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NFKB1P19838 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NFKB1P19838 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
NFKB1P19838 LINC00554-201ENST00000564841 3011 ntBASIC16.16■□□□□ 0.18
NFKB1P19838 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC16.16■□□□□ 0.18
NFKB1P19838 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC16.16■□□□□ 0.18
NFKB1P19838 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
NFKB1P19838 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NFKB1P19838 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
NFKB1P19838 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NFKB1P19838 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
NFKB1P19838 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC16.16■□□□□ 0.18
NFKB1P19838 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.16■□□□□ 0.18
NFKB1P19838 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NFKB1P19838 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
NFKB1P19838 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC16.16■□□□□ 0.18
NFKB1P19838 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NFKB1P19838 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC16.16■□□□□ 0.18
NFKB1P19838 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
NFKB1P19838 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NFKB1P19838 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NFKB1P19838 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NFKB1P19838 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NFKB1P19838 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NFKB1P19838 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NFKB1P19838 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NFKB1P19838 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NFKB1P19838 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NFKB1P19838 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC16.16■□□□□ 0.18
NFKB1P19838 HIST3H2BA-201ENST00000436555 524 ntBASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms