Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
NCLP19338 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC19.06■□□□□ 0.64
NCLP19338 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC19.06■□□□□ 0.64
NCLP19338 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC19.06■□□□□ 0.64
NCLP19338 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC19.06■□□□□ 0.64
NCLP19338 SSR4P1-203ENST00000599569 2260 ntBASIC19.05■□□□□ 0.64
NCLP19338 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
NCLP19338 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC19.05■□□□□ 0.64
NCLP19338 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NCLP19338 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NCLP19338 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NCLP19338 SNX18-202ENST00000343017 3140 ntBASIC19.05■□□□□ 0.64
NCLP19338 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC19.05■□□□□ 0.64
NCLP19338 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC19.05■□□□□ 0.64
NCLP19338 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC19.05■□□□□ 0.64
NCLP19338 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC19.05■□□□□ 0.64
NCLP19338 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
NCLP19338 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
NCLP19338 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
NCLP19338 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NCLP19338 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC19.05■□□□□ 0.64
NCLP19338 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NCLP19338 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
NCLP19338 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC19.05■□□□□ 0.64
NCLP19338 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NCLP19338 FABP5-202ENST00000396359 986 ntTSL 5 BASIC19.05■□□□□ 0.64
NCLP19338 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
NCLP19338 STARD13-205ENST00000439831 945 ntTSL 2 BASIC19.05■□□□□ 0.64
NCLP19338 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC19.05■□□□□ 0.64
NCLP19338 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NCLP19338 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC19.05■□□□□ 0.64
NCLP19338 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC19.05■□□□□ 0.64
NCLP19338 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC19.05■□□□□ 0.64
NCLP19338 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NCLP19338 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NCLP19338 AC027601.4-201ENST00000611259 610 ntBASIC19.05■□□□□ 0.64
NCLP19338 BSG-214ENST00000614867 960 ntTSL 3 BASIC19.05■□□□□ 0.64
NCLP19338 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC19.05■□□□□ 0.64
NCLP19338 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
NCLP19338 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC19.05■□□□□ 0.64
NCLP19338 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NCLP19338 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NCLP19338 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NCLP19338 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC19.05■□□□□ 0.64
NCLP19338 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NCLP19338 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NCLP19338 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
NCLP19338 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC19.05■□□□□ 0.64
NCLP19338 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NCLP19338 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NCLP19338 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
NCLP19338 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
NCLP19338 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC19.04■□□□□ 0.64
NCLP19338 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
NCLP19338 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
NCLP19338 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NCLP19338 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
NCLP19338 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
NCLP19338 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
NCLP19338 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
NCLP19338 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NCLP19338 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NCLP19338 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NCLP19338 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NCLP19338 MIR940-201ENST00000401276 94 ntBASIC19.04■□□□□ 0.64
NCLP19338 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC19.04■□□□□ 0.64
NCLP19338 SLC9A3P2-201ENST00000447821 2021 ntBASIC19.04■□□□□ 0.64
NCLP19338 RPS15P9-201ENST00000494093 319 ntBASIC19.04■□□□□ 0.64
NCLP19338 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC19.04■□□□□ 0.64
NCLP19338 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
NCLP19338 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC19.04■□□□□ 0.64
NCLP19338 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC19.04■□□□□ 0.64
NCLP19338 AC005412.3-201ENST00000580309 715 ntBASIC19.04■□□□□ 0.64
NCLP19338 GPALPP1-207ENST00000611650 899 ntBASIC19.04■□□□□ 0.64
NCLP19338 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
NCLP19338 WT1-AS_2.1-201ENST00000613208 137 ntBASIC19.04■□□□□ 0.64
NCLP19338 FAM197Y3-203ENST00000618346 717 ntBASIC19.04■□□□□ 0.64
NCLP19338 MIR1199-201ENST00000621445 119 ntBASIC19.04■□□□□ 0.64
NCLP19338 PGM5P2-202ENST00000637225 1043 ntBASIC19.04■□□□□ 0.64
NCLP19338 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NCLP19338 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
NCLP19338 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC19.04■□□□□ 0.64
NCLP19338 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
NCLP19338 AC067750.1-201ENST00000608826 6545 ntBASIC19.04■□□□□ 0.64
NCLP19338 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
NCLP19338 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
NCLP19338 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC19.03■□□□□ 0.64
NCLP19338 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NCLP19338 CNTNAP3P2-201ENST00000617175 3861 ntBASIC19.03■□□□□ 0.64
NCLP19338 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
NCLP19338 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC19.03■□□□□ 0.64
NCLP19338 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
NCLP19338 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC19.03■□□□□ 0.64
NCLP19338 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC19.03■□□□□ 0.64
NCLP19338 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NCLP19338 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC19.03■□□□□ 0.64
NCLP19338 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NCLP19338 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC19.03■□□□□ 0.64
NCLP19338 RER1-203ENST00000378513 3000 ntTSL 3 BASIC19.03■□□□□ 0.64
NCLP19338 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms