Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PDGFRAP16234 KRT8P12-202ENST00000472924 1397 ntBASIC16.69■□□□□ 0.26
PDGFRAP16234 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC16.69■□□□□ 0.26
PDGFRAP16234 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
PDGFRAP16234 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PDGFRAP16234 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PDGFRAP16234 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
PDGFRAP16234 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PDGFRAP16234 CENPM-205ENST00000404067 905 ntTSL 3 BASIC16.69■□□□□ 0.26
PDGFRAP16234 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
PDGFRAP16234 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PDGFRAP16234 SATB1-217ENST00000493952 626 ntTSL 3 BASIC16.69■□□□□ 0.26
PDGFRAP16234 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PDGFRAP16234 IGHV3-42-201ENST00000520410 361 ntBASIC16.69■□□□□ 0.26
PDGFRAP16234 AC069120.2-201ENST00000524091 540 ntBASIC16.69■□□□□ 0.26
PDGFRAP16234 SUOX-214ENST00000551841 906 ntTSL 3 BASIC16.69■□□□□ 0.26
PDGFRAP16234 AL079307.3-201ENST00000556114 283 ntBASIC16.69■□□□□ 0.26
PDGFRAP16234 MIR4313-201ENST00000580760 101 ntBASIC16.69■□□□□ 0.26
PDGFRAP16234 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC16.69■□□□□ 0.26
PDGFRAP16234 SPIB-207ENST00000597855 564 ntTSL 4 BASIC16.69■□□□□ 0.26
PDGFRAP16234 AL589739.1-201ENST00000607720 493 ntBASIC16.69■□□□□ 0.26
PDGFRAP16234 COQ4-205ENST00000609948 956 ntTSL 2 BASIC16.69■□□□□ 0.26
PDGFRAP16234 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
PDGFRAP16234 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PDGFRAP16234 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
PDGFRAP16234 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC16.69■□□□□ 0.26
PDGFRAP16234 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
PDGFRAP16234 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PDGFRAP16234 IMPDH1P4-201ENST00000445028 1534 ntBASIC16.69■□□□□ 0.26
PDGFRAP16234 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
PDGFRAP16234 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
PDGFRAP16234 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
PDGFRAP16234 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
PDGFRAP16234 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
PDGFRAP16234 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
PDGFRAP16234 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
PDGFRAP16234 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC16.68■□□□□ 0.26
PDGFRAP16234 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC16.68■□□□□ 0.26
PDGFRAP16234 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PDGFRAP16234 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
PDGFRAP16234 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
PDGFRAP16234 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PDGFRAP16234 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PDGFRAP16234 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PDGFRAP16234 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PDGFRAP16234 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC16.68■□□□□ 0.26
PDGFRAP16234 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
PDGFRAP16234 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC16.68■□□□□ 0.26
PDGFRAP16234 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PDGFRAP16234 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PDGFRAP16234 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PDGFRAP16234 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PDGFRAP16234 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC16.68■□□□□ 0.26
PDGFRAP16234 AZGP1P1-201ENST00000411909 902 ntBASIC16.68■□□□□ 0.26
PDGFRAP16234 AC055876.3-201ENST00000431496 288 ntBASIC16.68■□□□□ 0.26
PDGFRAP16234 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PDGFRAP16234 AC093214.1-201ENST00000511688 1107 ntBASIC16.68■□□□□ 0.26
PDGFRAP16234 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC16.68■□□□□ 0.26
PDGFRAP16234 DUT-210ENST00000559935 569 ntTSL 3 BASIC16.68■□□□□ 0.26
PDGFRAP16234 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC16.68■□□□□ 0.26
PDGFRAP16234 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC16.68■□□□□ 0.26
PDGFRAP16234 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
PDGFRAP16234 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC16.68■□□□□ 0.26
PDGFRAP16234 AC138649.4-201ENST00000612222 287 ntBASIC16.68■□□□□ 0.26
PDGFRAP16234 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
PDGFRAP16234 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
PDGFRAP16234 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
PDGFRAP16234 AL162727.3-201ENST00000635661 2787 ntBASIC16.68■□□□□ 0.26
PDGFRAP16234 AL139384.1-201ENST00000612143 3047 ntBASIC16.68■□□□□ 0.26
PDGFRAP16234 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PDGFRAP16234 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PDGFRAP16234 CETN4P-206ENST00000642099 2168 ntBASIC16.68■□□□□ 0.26
PDGFRAP16234 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC16.68■□□□□ 0.26
PDGFRAP16234 AC092850.2-201ENST00000623821 2697 ntBASIC16.68■□□□□ 0.26
PDGFRAP16234 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PDGFRAP16234 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
PDGFRAP16234 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.68■□□□□ 0.26
PDGFRAP16234 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
PDGFRAP16234 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
PDGFRAP16234 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PDGFRAP16234 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
PDGFRAP16234 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PDGFRAP16234 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC16.68■□□□□ 0.26
PDGFRAP16234 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC16.67■□□□□ 0.26
PDGFRAP16234 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.67■□□□□ 0.26
PDGFRAP16234 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PDGFRAP16234 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PDGFRAP16234 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PDGFRAP16234 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
PDGFRAP16234 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.67■□□□□ 0.26
PDGFRAP16234 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PDGFRAP16234 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC16.67■□□□□ 0.26
PDGFRAP16234 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
PDGFRAP16234 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PDGFRAP16234 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.67■□□□□ 0.26
PDGFRAP16234 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC16.67■□□□□ 0.26
PDGFRAP16234 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC16.67■□□□□ 0.26
PDGFRAP16234 GRAMD4P3-201ENST00000621665 1669 ntBASIC16.67■□□□□ 0.26
PDGFRAP16234 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PDGFRAP16234 FO393414.2-201ENST00000405153 598 ntBASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms