Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC26.5■■□□□ 1.83
CFTRP13569 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC26.49■■□□□ 1.83
CFTRP13569 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
CFTRP13569 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC26.49■■□□□ 1.83
CFTRP13569 FGFR3P1-201ENST00000449999 601 ntBASIC26.49■■□□□ 1.83
CFTRP13569 AL353637.1-201ENST00000451571 732 ntBASIC26.49■■□□□ 1.83
CFTRP13569 PFN2-205ENST00000461868 613 ntTSL 2 BASIC26.49■■□□□ 1.83
CFTRP13569 AC004066.1-201ENST00000502488 802 ntBASIC26.49■■□□□ 1.83
CFTRP13569 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC26.49■■□□□ 1.83
CFTRP13569 MIR6756-201ENST00000616240 63 ntBASIC26.49■■□□□ 1.83
CFTRP13569 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC26.49■■□□□ 1.83
CFTRP13569 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC26.49■■□□□ 1.83
CFTRP13569 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC26.49■■□□□ 1.83
CFTRP13569 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC26.49■■□□□ 1.83
CFTRP13569 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
CFTRP13569 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
CFTRP13569 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC26.49■■□□□ 1.83
CFTRP13569 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
CFTRP13569 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
CFTRP13569 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
CFTRP13569 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC26.49■■□□□ 1.83
CFTRP13569 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC26.49■■□□□ 1.83
CFTRP13569 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
CFTRP13569 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
CFTRP13569 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC26.49■■□□□ 1.83
CFTRP13569 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
CFTRP13569 AC026316.1-201ENST00000398900 414 ntBASIC26.49■■□□□ 1.83
CFTRP13569 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC26.49■■□□□ 1.83
CFTRP13569 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC26.49■■□□□ 1.83
CFTRP13569 MESTP3-201ENST00000503460 968 ntBASIC26.49■■□□□ 1.83
CFTRP13569 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC26.49■■□□□ 1.83
CFTRP13569 CFL1-206ENST00000527344 962 ntTSL 2 BASIC26.49■■□□□ 1.83
CFTRP13569 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
CFTRP13569 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC26.49■■□□□ 1.83
CFTRP13569 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC26.48■■□□□ 1.83
CFTRP13569 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC26.48■■□□□ 1.83
CFTRP13569 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC26.48■■□□□ 1.83
CFTRP13569 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
CFTRP13569 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC26.48■■□□□ 1.83
CFTRP13569 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
CFTRP13569 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC26.48■■□□□ 1.83
CFTRP13569 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
CFTRP13569 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC26.48■■□□□ 1.83
CFTRP13569 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
CFTRP13569 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC26.48■■□□□ 1.83
CFTRP13569 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC26.48■■□□□ 1.83
CFTRP13569 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
CFTRP13569 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC26.48■■□□□ 1.83
CFTRP13569 TUBB8P8-201ENST00000458717 1058 ntBASIC26.48■■□□□ 1.83
CFTRP13569 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
CFTRP13569 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC26.48■■□□□ 1.83
CFTRP13569 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC26.48■■□□□ 1.83
CFTRP13569 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC26.48■■□□□ 1.83
CFTRP13569 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC26.48■■□□□ 1.83
CFTRP13569 DUX4L47-201ENST00000566374 394 ntBASIC26.48■■□□□ 1.83
CFTRP13569 AL358472.3-201ENST00000608147 415 ntBASIC26.48■■□□□ 1.83
CFTRP13569 HLA-C-210ENST00000640219 976 ntBASIC26.48■■□□□ 1.83
CFTRP13569 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
CFTRP13569 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
CFTRP13569 AP000593.2-201ENST00000542775 1433 ntBASIC26.47■■□□□ 1.83
CFTRP13569 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
CFTRP13569 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC26.47■■□□□ 1.83
CFTRP13569 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
CFTRP13569 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC26.47■■□□□ 1.83
CFTRP13569 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
CFTRP13569 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC26.47■■□□□ 1.83
CFTRP13569 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC26.47■■□□□ 1.83
CFTRP13569 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC26.47■■□□□ 1.83
CFTRP13569 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
CFTRP13569 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC26.47■■□□□ 1.83
CFTRP13569 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC26.47■■□□□ 1.83
CFTRP13569 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC26.47■■□□□ 1.83
CFTRP13569 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
CFTRP13569 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC26.47■■□□□ 1.83
CFTRP13569 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
CFTRP13569 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC26.47■■□□□ 1.83
CFTRP13569 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC26.47■■□□□ 1.83
CFTRP13569 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
CFTRP13569 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC26.47■■□□□ 1.83
CFTRP13569 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
CFTRP13569 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
CFTRP13569 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC26.47■■□□□ 1.83
CFTRP13569 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
CFTRP13569 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC26.46■■□□□ 1.83
CFTRP13569 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
CFTRP13569 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
CFTRP13569 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
CFTRP13569 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC26.46■■□□□ 1.83
CFTRP13569 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC26.46■■□□□ 1.83
CFTRP13569 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
CFTRP13569 RPL13AP19-201ENST00000434320 584 ntBASIC26.46■■□□□ 1.83
CFTRP13569 NOC2LP1-201ENST00000450578 752 ntBASIC26.46■■□□□ 1.83
CFTRP13569 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC26.46■■□□□ 1.83
CFTRP13569 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
CFTRP13569 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
CFTRP13569 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC26.46■■□□□ 1.83
CFTRP13569 AC090164.2-201ENST00000611487 516 ntBASIC26.46■■□□□ 1.83
CFTRP13569 COX6A1P2-201ENST00000620597 330 ntBASIC26.46■■□□□ 1.83
CFTRP13569 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC26.46■■□□□ 1.83
CFTRP13569 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms