Protein–RNA interactions for Protein: P0DP25

CALM3, Calmodulin-3, humanhuman

Predictions only

Length 149 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALM3P0DP25 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
CALM3P0DP25 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CALM3P0DP25 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CALM3P0DP25 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
CALM3P0DP25 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC18.42■□□□□ 0.54
CALM3P0DP25 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC18.42■□□□□ 0.54
CALM3P0DP25 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC18.42■□□□□ 0.54
CALM3P0DP25 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC18.42■□□□□ 0.54
CALM3P0DP25 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC18.42■□□□□ 0.54
CALM3P0DP25 STOM-203ENST00000538954 1257 ntTSL 5 BASIC18.42■□□□□ 0.54
CALM3P0DP25 AC135586.1-201ENST00000539323 574 ntBASIC18.42■□□□□ 0.54
CALM3P0DP25 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
CALM3P0DP25 INO80C-206ENST00000586489 594 ntTSL 3 BASIC18.42■□□□□ 0.54
CALM3P0DP25 AL096865.1-201ENST00000606796 927 ntBASIC18.42■□□□□ 0.54
CALM3P0DP25 AC004461.2-201ENST00000629517 803 ntBASIC18.42■□□□□ 0.54
CALM3P0DP25 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CALM3P0DP25 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC18.42■□□□□ 0.54
CALM3P0DP25 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CALM3P0DP25 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CALM3P0DP25 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
CALM3P0DP25 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CALM3P0DP25 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC18.41■□□□□ 0.54
CALM3P0DP25 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC18.41■□□□□ 0.54
CALM3P0DP25 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC18.41■□□□□ 0.54
CALM3P0DP25 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
CALM3P0DP25 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC18.41■□□□□ 0.54
CALM3P0DP25 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC18.41■□□□□ 0.54
CALM3P0DP25 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CALM3P0DP25 PRAL-201ENST00000624952 3286 ntBASIC18.41■□□□□ 0.54
CALM3P0DP25 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CALM3P0DP25 HLA-DQB2-231ENST00000435145 2026 ntBASIC18.41■□□□□ 0.54
CALM3P0DP25 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC18.41■□□□□ 0.54
CALM3P0DP25 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
CALM3P0DP25 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CALM3P0DP25 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CALM3P0DP25 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC18.41■□□□□ 0.54
CALM3P0DP25 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC18.41■□□□□ 0.54
CALM3P0DP25 AC015922.1-201ENST00000421102 1152 ntBASIC18.41■□□□□ 0.54
CALM3P0DP25 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC18.41■□□□□ 0.54
CALM3P0DP25 TIMM17BP1-201ENST00000545713 516 ntBASIC18.41■□□□□ 0.54
CALM3P0DP25 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
CALM3P0DP25 SPCS2P1-201ENST00000561636 679 ntBASIC18.41■□□□□ 0.54
CALM3P0DP25 AC092337.1-201ENST00000568699 1129 ntBASIC18.41■□□□□ 0.54
CALM3P0DP25 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC18.41■□□□□ 0.54
CALM3P0DP25 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
CALM3P0DP25 AC004840.1-201ENST00000636359 365 ntBASIC18.41■□□□□ 0.54
CALM3P0DP25 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC18.41■□□□□ 0.54
CALM3P0DP25 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CALM3P0DP25 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CALM3P0DP25 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CALM3P0DP25 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC18.41■□□□□ 0.54
CALM3P0DP25 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CALM3P0DP25 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CALM3P0DP25 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC18.41■□□□□ 0.54
CALM3P0DP25 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CALM3P0DP25 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CALM3P0DP25 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CALM3P0DP25 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC18.4■□□□□ 0.54
CALM3P0DP25 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC18.4■□□□□ 0.54
CALM3P0DP25 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
CALM3P0DP25 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CALM3P0DP25 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CALM3P0DP25 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CALM3P0DP25 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC18.4■□□□□ 0.54
CALM3P0DP25 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CALM3P0DP25 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CALM3P0DP25 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC18.4■□□□□ 0.54
CALM3P0DP25 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CALM3P0DP25 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CALM3P0DP25 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
CALM3P0DP25 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
CALM3P0DP25 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC18.4■□□□□ 0.54
CALM3P0DP25 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CALM3P0DP25 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC18.4■□□□□ 0.54
CALM3P0DP25 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
CALM3P0DP25 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CALM3P0DP25 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CALM3P0DP25 REEP4-207ENST00000523293 913 ntTSL 3 BASIC18.4■□□□□ 0.54
CALM3P0DP25 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC18.4■□□□□ 0.54
CALM3P0DP25 LINC01115-203ENST00000606068 577 ntBASIC18.4■□□□□ 0.54
CALM3P0DP25 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC18.4■□□□□ 0.54
CALM3P0DP25 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CALM3P0DP25 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CALM3P0DP25 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CALM3P0DP25 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC18.4■□□□□ 0.54
CALM3P0DP25 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
CALM3P0DP25 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CALM3P0DP25 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
CALM3P0DP25 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC18.4■□□□□ 0.54
CALM3P0DP25 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CALM3P0DP25 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
CALM3P0DP25 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CALM3P0DP25 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CALM3P0DP25 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CALM3P0DP25 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CALM3P0DP25 AP003680.1-201ENST00000598970 3660 ntBASIC18.39■□□□□ 0.54
CALM3P0DP25 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CALM3P0DP25 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
CALM3P0DP25 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC18.39■□□□□ 0.54
CALM3P0DP25 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms