Protein–RNA interactions for Protein: P0DP08

IGHV4-38-2, Immunoglobulin heavy variable 4-38-2, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-38-2P0DP08 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
IGHV4-38-2P0DP08 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
IGHV4-38-2P0DP08 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
IGHV4-38-2P0DP08 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
IGHV4-38-2P0DP08 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
IGHV4-38-2P0DP08 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
IGHV4-38-2P0DP08 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
IGHV4-38-2P0DP08 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC12.78□□□□□ -0.36
IGHV4-38-2P0DP08 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
IGHV4-38-2P0DP08 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
IGHV4-38-2P0DP08 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
IGHV4-38-2P0DP08 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
IGHV4-38-2P0DP08 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC12.78□□□□□ -0.36
IGHV4-38-2P0DP08 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC12.78□□□□□ -0.36
IGHV4-38-2P0DP08 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC12.78□□□□□ -0.36
IGHV4-38-2P0DP08 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
IGHV4-38-2P0DP08 INTS4P2-202ENST00000614726 2019 ntBASIC12.78□□□□□ -0.36
IGHV4-38-2P0DP08 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
IGHV4-38-2P0DP08 AC018695.7-201ENST00000624587 2492 ntBASIC12.78□□□□□ -0.36
IGHV4-38-2P0DP08 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
IGHV4-38-2P0DP08 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC12.78□□□□□ -0.36
IGHV4-38-2P0DP08 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
IGHV4-38-2P0DP08 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
IGHV4-38-2P0DP08 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
IGHV4-38-2P0DP08 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
IGHV4-38-2P0DP08 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
IGHV4-38-2P0DP08 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC12.78□□□□□ -0.36
IGHV4-38-2P0DP08 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
IGHV4-38-2P0DP08 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
IGHV4-38-2P0DP08 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC12.78□□□□□ -0.36
IGHV4-38-2P0DP08 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
IGHV4-38-2P0DP08 AC134915.1-201ENST00000426461 574 ntBASIC12.78□□□□□ -0.36
IGHV4-38-2P0DP08 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
IGHV4-38-2P0DP08 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC12.78□□□□□ -0.36
IGHV4-38-2P0DP08 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
IGHV4-38-2P0DP08 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC12.78□□□□□ -0.36
IGHV4-38-2P0DP08 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC12.78□□□□□ -0.36
IGHV4-38-2P0DP08 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
IGHV4-38-2P0DP08 VDAC1P7-201ENST00000462417 847 ntBASIC12.78□□□□□ -0.36
IGHV4-38-2P0DP08 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC12.78□□□□□ -0.36
IGHV4-38-2P0DP08 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC12.78□□□□□ -0.36
IGHV4-38-2P0DP08 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC12.78□□□□□ -0.36
IGHV4-38-2P0DP08 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC12.78□□□□□ -0.36
IGHV4-38-2P0DP08 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC12.78□□□□□ -0.36
IGHV4-38-2P0DP08 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC12.78□□□□□ -0.36
IGHV4-38-2P0DP08 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC12.78□□□□□ -0.36
IGHV4-38-2P0DP08 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC12.78□□□□□ -0.36
IGHV4-38-2P0DP08 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC12.78□□□□□ -0.36
IGHV4-38-2P0DP08 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
IGHV4-38-2P0DP08 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
IGHV4-38-2P0DP08 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
IGHV4-38-2P0DP08 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC12.78□□□□□ -0.36
IGHV4-38-2P0DP08 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC12.78□□□□□ -0.36
IGHV4-38-2P0DP08 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
IGHV4-38-2P0DP08 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
IGHV4-38-2P0DP08 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC12.78□□□□□ -0.36
IGHV4-38-2P0DP08 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
IGHV4-38-2P0DP08 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC12.78□□□□□ -0.36
IGHV4-38-2P0DP08 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
IGHV4-38-2P0DP08 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
IGHV4-38-2P0DP08 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
IGHV4-38-2P0DP08 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
IGHV4-38-2P0DP08 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
IGHV4-38-2P0DP08 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
IGHV4-38-2P0DP08 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
IGHV4-38-2P0DP08 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
IGHV4-38-2P0DP08 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
IGHV4-38-2P0DP08 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.36
IGHV4-38-2P0DP08 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC12.77□□□□□ -0.36
IGHV4-38-2P0DP08 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
IGHV4-38-2P0DP08 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
IGHV4-38-2P0DP08 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
IGHV4-38-2P0DP08 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
IGHV4-38-2P0DP08 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC12.77□□□□□ -0.36
IGHV4-38-2P0DP08 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
IGHV4-38-2P0DP08 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC12.77□□□□□ -0.36
IGHV4-38-2P0DP08 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
IGHV4-38-2P0DP08 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
IGHV4-38-2P0DP08 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
IGHV4-38-2P0DP08 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC12.77□□□□□ -0.36
IGHV4-38-2P0DP08 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.36
IGHV4-38-2P0DP08 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
IGHV4-38-2P0DP08 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC12.77□□□□□ -0.36
IGHV4-38-2P0DP08 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
IGHV4-38-2P0DP08 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
IGHV4-38-2P0DP08 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC12.77□□□□□ -0.37
IGHV4-38-2P0DP08 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
IGHV4-38-2P0DP08 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
IGHV4-38-2P0DP08 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
IGHV4-38-2P0DP08 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
IGHV4-38-2P0DP08 MGST3-203ENST00000367885 680 ntTSL 2 BASIC12.77□□□□□ -0.37
IGHV4-38-2P0DP08 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
IGHV4-38-2P0DP08 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC12.77□□□□□ -0.37
IGHV4-38-2P0DP08 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC12.77□□□□□ -0.37
IGHV4-38-2P0DP08 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC12.77□□□□□ -0.37
IGHV4-38-2P0DP08 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC12.77□□□□□ -0.37
IGHV4-38-2P0DP08 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC12.77□□□□□ -0.37
IGHV4-38-2P0DP08 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
IGHV4-38-2P0DP08 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
IGHV4-38-2P0DP08 USP32P1-208ENST00000506594 1164 ntBASIC12.77□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms