Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
CHGBP05060 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CHGBP05060 AP005018.1-201ENST00000525475 301 ntBASIC19.01■□□□□ 0.63
CHGBP05060 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC19.01■□□□□ 0.63
CHGBP05060 CDK4-206ENST00000549606 558 ntTSL 2 BASIC19.01■□□□□ 0.63
CHGBP05060 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC19.01■□□□□ 0.63
CHGBP05060 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
CHGBP05060 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC19.01■□□□□ 0.63
CHGBP05060 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC19.01■□□□□ 0.63
CHGBP05060 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
CHGBP05060 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CHGBP05060 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CHGBP05060 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC19.01■□□□□ 0.63
CHGBP05060 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CHGBP05060 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CHGBP05060 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
CHGBP05060 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
CHGBP05060 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
CHGBP05060 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CHGBP05060 TP73-209ENST00000603362 1668 ntTSL 5 BASIC19.01■□□□□ 0.63
CHGBP05060 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
CHGBP05060 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
CHGBP05060 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC19.01■□□□□ 0.63
CHGBP05060 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CHGBP05060 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
CHGBP05060 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC19■□□□□ 0.63
CHGBP05060 DEK-201ENST00000244776 1441 ntTSL 2 BASIC19■□□□□ 0.63
CHGBP05060 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC19■□□□□ 0.63
CHGBP05060 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CHGBP05060 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
CHGBP05060 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
CHGBP05060 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC19■□□□□ 0.63
CHGBP05060 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CHGBP05060 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC19■□□□□ 0.63
CHGBP05060 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CHGBP05060 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CHGBP05060 CALY-202ENST00000368555 783 ntTSL 2 BASIC19■□□□□ 0.63
CHGBP05060 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC19■□□□□ 0.63
CHGBP05060 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC19■□□□□ 0.63
CHGBP05060 CRB3P1-201ENST00000449338 276 ntBASIC19■□□□□ 0.63
CHGBP05060 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC19■□□□□ 0.63
CHGBP05060 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC19■□□□□ 0.63
CHGBP05060 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
CHGBP05060 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC19■□□□□ 0.63
CHGBP05060 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC19■□□□□ 0.63
CHGBP05060 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC19■□□□□ 0.63
CHGBP05060 AC004233.3-201ENST00000607794 1269 ntBASIC19■□□□□ 0.63
CHGBP05060 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC19■□□□□ 0.63
CHGBP05060 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC19■□□□□ 0.63
CHGBP05060 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC19■□□□□ 0.63
CHGBP05060 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CHGBP05060 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC19■□□□□ 0.63
CHGBP05060 ILF3-AS1-201ENST00000591501 1983 ntBASIC19■□□□□ 0.63
CHGBP05060 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC19■□□□□ 0.63
CHGBP05060 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC19■□□□□ 0.63
CHGBP05060 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CHGBP05060 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CHGBP05060 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CHGBP05060 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC19■□□□□ 0.63
CHGBP05060 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC19■□□□□ 0.63
CHGBP05060 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHGBP05060 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC18.99■□□□□ 0.63
CHGBP05060 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHGBP05060 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHGBP05060 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
CHGBP05060 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC18.99■□□□□ 0.63
CHGBP05060 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHGBP05060 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
CHGBP05060 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHGBP05060 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
CHGBP05060 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CHGBP05060 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CHGBP05060 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHGBP05060 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHGBP05060 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
CHGBP05060 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHGBP05060 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
CHGBP05060 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
CHGBP05060 AC015922.1-201ENST00000421102 1152 ntBASIC18.99■□□□□ 0.63
CHGBP05060 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC18.99■□□□□ 0.63
CHGBP05060 TPRX2P-201ENST00000535362 881 ntBASIC18.99■□□□□ 0.63
CHGBP05060 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC18.99■□□□□ 0.63
CHGBP05060 SPDYE22P-201ENST00000582158 798 ntBASIC18.99■□□□□ 0.63
CHGBP05060 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHGBP05060 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC18.99■□□□□ 0.63
CHGBP05060 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC18.99■□□□□ 0.63
CHGBP05060 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CHGBP05060 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHGBP05060 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC18.99■□□□□ 0.63
CHGBP05060 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHGBP05060 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CHGBP05060 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC18.99■□□□□ 0.63
CHGBP05060 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC18.99■□□□□ 0.63
CHGBP05060 OR6D1P-202ENST00000641007 5290 ntBASIC18.99■□□□□ 0.63
CHGBP05060 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
CHGBP05060 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHGBP05060 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHGBP05060 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHGBP05060 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHGBP05060 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms