Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 AL450472.2-201ENST00000603663 1156 ntBASIC15.78■□□□□ 0.12
PDGFBP01127 AC097359.3-201ENST00000603982 1210 ntBASIC15.78■□□□□ 0.12
PDGFBP01127 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC15.78■□□□□ 0.12
PDGFBP01127 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC15.78■□□□□ 0.12
PDGFBP01127 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC15.78■□□□□ 0.12
PDGFBP01127 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PDGFBP01127 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC15.78■□□□□ 0.12
PDGFBP01127 AL138799.1-201ENST00000448213 1675 ntBASIC15.78■□□□□ 0.12
PDGFBP01127 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
PDGFBP01127 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PDGFBP01127 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PDGFBP01127 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
PDGFBP01127 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
PDGFBP01127 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PDGFBP01127 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PDGFBP01127 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PDGFBP01127 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC15.78■□□□□ 0.12
PDGFBP01127 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
PDGFBP01127 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC15.77■□□□□ 0.12
PDGFBP01127 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
PDGFBP01127 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PDGFBP01127 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
PDGFBP01127 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
PDGFBP01127 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC15.77■□□□□ 0.12
PDGFBP01127 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
PDGFBP01127 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC15.77■□□□□ 0.12
PDGFBP01127 AC060834.1-201ENST00000443027 2032 ntBASIC15.77■□□□□ 0.12
PDGFBP01127 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PDGFBP01127 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PDGFBP01127 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
PDGFBP01127 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PDGFBP01127 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
PDGFBP01127 RNU1-114P-201ENST00000365297 166 ntBASIC15.77■□□□□ 0.12
PDGFBP01127 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PDGFBP01127 PARVG-202ENST00000415224 999 ntTSL 2 BASIC15.77■□□□□ 0.12
PDGFBP01127 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC15.77■□□□□ 0.12
PDGFBP01127 GAPDHP40-201ENST00000505218 1006 ntBASIC15.77■□□□□ 0.12
PDGFBP01127 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC15.77■□□□□ 0.12
PDGFBP01127 CFL1-206ENST00000527344 962 ntTSL 2 BASIC15.77■□□□□ 0.12
PDGFBP01127 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
PDGFBP01127 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC15.77■□□□□ 0.12
PDGFBP01127 AC011491.1-203ENST00000637688 543 ntBASIC15.77■□□□□ 0.12
PDGFBP01127 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PDGFBP01127 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
PDGFBP01127 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC15.77■□□□□ 0.11
PDGFBP01127 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
PDGFBP01127 AL592424.1-201ENST00000563624 1536 ntBASIC15.77■□□□□ 0.11
PDGFBP01127 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC15.77■□□□□ 0.11
PDGFBP01127 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PDGFBP01127 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
PDGFBP01127 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PDGFBP01127 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PDGFBP01127 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
PDGFBP01127 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
PDGFBP01127 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PDGFBP01127 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
PDGFBP01127 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC15.76■□□□□ 0.11
PDGFBP01127 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
PDGFBP01127 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PDGFBP01127 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PDGFBP01127 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC15.76■□□□□ 0.11
PDGFBP01127 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
PDGFBP01127 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PDGFBP01127 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PDGFBP01127 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
PDGFBP01127 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PDGFBP01127 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
PDGFBP01127 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PDGFBP01127 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
PDGFBP01127 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC15.76■□□□□ 0.11
PDGFBP01127 AC234644.1-201ENST00000406065 370 ntBASIC15.76■□□□□ 0.11
PDGFBP01127 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC15.76■□□□□ 0.11
PDGFBP01127 FGFR3P1-201ENST00000449999 601 ntBASIC15.76■□□□□ 0.11
PDGFBP01127 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC15.76■□□□□ 0.11
PDGFBP01127 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC15.76■□□□□ 0.11
PDGFBP01127 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
PDGFBP01127 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PDGFBP01127 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC15.76■□□□□ 0.11
PDGFBP01127 BX539320.1-201ENST00000623759 877 ntBASIC15.76■□□□□ 0.11
PDGFBP01127 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PDGFBP01127 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PDGFBP01127 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PDGFBP01127 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC15.76■□□□□ 0.11
PDGFBP01127 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PDGFBP01127 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC15.76■□□□□ 0.11
PDGFBP01127 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PDGFBP01127 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PDGFBP01127 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PDGFBP01127 TK1-203ENST00000588734 1681 ntTSL 2 BASIC15.76■□□□□ 0.11
PDGFBP01127 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PDGFBP01127 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PDGFBP01127 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
PDGFBP01127 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PDGFBP01127 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC15.75■□□□□ 0.11
PDGFBP01127 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PDGFBP01127 NEFHP1-201ENST00000412845 2629 ntBASIC15.75■□□□□ 0.11
PDGFBP01127 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
PDGFBP01127 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PDGFBP01127 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC15.75■□□□□ 0.11
PDGFBP01127 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms