Protein–RNA interactions for Protein: O95741

CPNE6, Copine-6, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6O95741 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CPNE6O95741 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC15.64■□□□□ 0.09
CPNE6O95741 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC15.64■□□□□ 0.09
CPNE6O95741 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
CPNE6O95741 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC15.64■□□□□ 0.09
CPNE6O95741 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC15.64■□□□□ 0.09
CPNE6O95741 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
CPNE6O95741 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC15.64■□□□□ 0.09
CPNE6O95741 COX5BP8-201ENST00000416911 349 ntBASIC15.64■□□□□ 0.09
CPNE6O95741 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC15.64■□□□□ 0.09
CPNE6O95741 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC15.64■□□□□ 0.09
CPNE6O95741 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC15.64■□□□□ 0.09
CPNE6O95741 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CPNE6O95741 AC010336.2-201ENST00000564226 506 ntBASIC15.64■□□□□ 0.09
CPNE6O95741 TP53TG3HP-202ENST00000569755 579 ntBASIC15.64■□□□□ 0.09
CPNE6O95741 AC140912.1-201ENST00000577171 1054 ntBASIC15.64■□□□□ 0.09
CPNE6O95741 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC15.64■□□□□ 0.09
CPNE6O95741 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CPNE6O95741 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC15.64■□□□□ 0.09
CPNE6O95741 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC15.64■□□□□ 0.09
CPNE6O95741 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC15.64■□□□□ 0.09
CPNE6O95741 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CPNE6O95741 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CPNE6O95741 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC15.64■□□□□ 0.09
CPNE6O95741 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CPNE6O95741 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
CPNE6O95741 TNRC18P2-201ENST00000417666 2714 ntBASIC15.64■□□□□ 0.09
CPNE6O95741 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CPNE6O95741 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CPNE6O95741 ME2P1-201ENST00000426028 1970 ntBASIC15.64■□□□□ 0.09
CPNE6O95741 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
CPNE6O95741 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC15.64■□□□□ 0.09
CPNE6O95741 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
CPNE6O95741 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
CPNE6O95741 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC15.63■□□□□ 0.09
CPNE6O95741 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CPNE6O95741 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CPNE6O95741 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC15.63■□□□□ 0.09
CPNE6O95741 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC15.63■□□□□ 0.09
CPNE6O95741 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC15.63■□□□□ 0.09
CPNE6O95741 PCGF3-213ENST00000620529 1899 ntBASIC15.63■□□□□ 0.09
CPNE6O95741 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CPNE6O95741 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC15.63■□□□□ 0.09
CPNE6O95741 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CPNE6O95741 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CPNE6O95741 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CPNE6O95741 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
CPNE6O95741 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC15.63■□□□□ 0.09
CPNE6O95741 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CPNE6O95741 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CPNE6O95741 CU639417.3-201ENST00000624240 1404 ntBASIC15.63■□□□□ 0.09
CPNE6O95741 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CPNE6O95741 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CPNE6O95741 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC15.63■□□□□ 0.09
CPNE6O95741 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CPNE6O95741 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CPNE6O95741 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CPNE6O95741 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CPNE6O95741 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CPNE6O95741 SPDYE17-201ENST00000412399 783 ntBASIC15.63■□□□□ 0.09
CPNE6O95741 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC15.63■□□□□ 0.09
CPNE6O95741 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CPNE6O95741 DFFBP1-201ENST00000433250 979 ntBASIC15.63■□□□□ 0.09
CPNE6O95741 AL139010.1-201ENST00000454878 894 ntBASIC15.63■□□□□ 0.09
CPNE6O95741 AL512361.1-201ENST00000554200 418 ntBASIC15.63■□□□□ 0.09
CPNE6O95741 AC104794.3-201ENST00000566840 1248 ntBASIC15.63■□□□□ 0.09
CPNE6O95741 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC15.63■□□□□ 0.09
CPNE6O95741 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC15.63■□□□□ 0.09
CPNE6O95741 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC15.63■□□□□ 0.09
CPNE6O95741 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC15.63■□□□□ 0.09
CPNE6O95741 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CPNE6O95741 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC15.63■□□□□ 0.09
CPNE6O95741 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CPNE6O95741 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CPNE6O95741 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC15.63■□□□□ 0.09
CPNE6O95741 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CPNE6O95741 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC15.63■□□□□ 0.09
CPNE6O95741 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CPNE6O95741 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
CPNE6O95741 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
CPNE6O95741 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CPNE6O95741 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
CPNE6O95741 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
CPNE6O95741 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CPNE6O95741 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC15.63■□□□□ 0.09
CPNE6O95741 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CPNE6O95741 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC15.63■□□□□ 0.09
CPNE6O95741 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CPNE6O95741 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CPNE6O95741 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CPNE6O95741 AL391825.1-201ENST00000457671 1364 ntBASIC15.62■□□□□ 0.09
CPNE6O95741 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC15.62■□□□□ 0.09
CPNE6O95741 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC15.62■□□□□ 0.09
CPNE6O95741 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CPNE6O95741 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
CPNE6O95741 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CPNE6O95741 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CPNE6O95741 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CPNE6O95741 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CPNE6O95741 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms