Protein–RNA interactions for Protein: O75112

LDB3, LIM domain-binding protein 3, humanhuman

Predictions only

Length 727 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3O75112 AC241585.1-201ENST00000433527 519 ntBASIC14.97□□□□□ -0.01
LDB3O75112 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
LDB3O75112 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC14.97□□□□□ -0.01
LDB3O75112 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC14.97□□□□□ -0.01
LDB3O75112 SERBP1P3-201ENST00000459980 809 ntBASIC14.97□□□□□ -0.01
LDB3O75112 LY6E-204ENST00000519546 971 ntTSL 2 BASIC14.97□□□□□ -0.01
LDB3O75112 DUT-210ENST00000559935 569 ntTSL 3 BASIC14.97□□□□□ -0.01
LDB3O75112 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC14.97□□□□□ -0.01
LDB3O75112 MIR6069-201ENST00000620069 79 ntBASIC14.97□□□□□ -0.01
LDB3O75112 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LDB3O75112 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
LDB3O75112 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LDB3O75112 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LDB3O75112 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
LDB3O75112 CICP13-201ENST00000422015 2789 ntBASIC14.97□□□□□ -0.01
LDB3O75112 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
LDB3O75112 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
LDB3O75112 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
LDB3O75112 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LDB3O75112 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LDB3O75112 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC14.97□□□□□ -0.01
LDB3O75112 VILL-207ENST00000465644 1857 ntTSL 5 BASIC14.97□□□□□ -0.01
LDB3O75112 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
LDB3O75112 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
LDB3O75112 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LDB3O75112 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC14.97□□□□□ -0.01
LDB3O75112 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC14.97□□□□□ -0.01
LDB3O75112 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC14.96□□□□□ -0.01
LDB3O75112 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LDB3O75112 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
LDB3O75112 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC14.96□□□□□ -0.01
LDB3O75112 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC14.96□□□□□ -0.01
LDB3O75112 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LDB3O75112 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LDB3O75112 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
LDB3O75112 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
LDB3O75112 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
LDB3O75112 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
LDB3O75112 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LDB3O75112 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LDB3O75112 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC14.96□□□□□ -0.01
LDB3O75112 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LDB3O75112 VMA21-202ENST00000370361 693 ntTSL 5 BASIC14.96□□□□□ -0.01
LDB3O75112 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
LDB3O75112 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC14.96□□□□□ -0.01
LDB3O75112 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
LDB3O75112 PTK7-212ENST00000476760 902 ntTSL 2 BASIC14.96□□□□□ -0.01
LDB3O75112 RN7SL618P-201ENST00000477850 296 ntBASIC14.96□□□□□ -0.01
LDB3O75112 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC14.96□□□□□ -0.01
LDB3O75112 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC14.96□□□□□ -0.01
LDB3O75112 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC14.96□□□□□ -0.01
LDB3O75112 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC14.96□□□□□ -0.01
LDB3O75112 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC14.96□□□□□ -0.01
LDB3O75112 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC14.96□□□□□ -0.01
LDB3O75112 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
LDB3O75112 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC14.96□□□□□ -0.01
LDB3O75112 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC14.96□□□□□ -0.01
LDB3O75112 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC14.96□□□□□ -0.01
LDB3O75112 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
LDB3O75112 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
LDB3O75112 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LDB3O75112 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC14.96□□□□□ -0.01
LDB3O75112 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC14.96□□□□□ -0.01
LDB3O75112 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
LDB3O75112 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC14.96□□□□□ -0.02
LDB3O75112 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
LDB3O75112 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC14.96□□□□□ -0.02
LDB3O75112 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
LDB3O75112 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
LDB3O75112 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
LDB3O75112 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC14.95□□□□□ -0.02
LDB3O75112 GRN-214ENST00000589265 1632 ntTSL 5 BASIC14.95□□□□□ -0.02
LDB3O75112 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LDB3O75112 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
LDB3O75112 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC14.95□□□□□ -0.02
LDB3O75112 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
LDB3O75112 FLJ16779-201ENST00000612722 7638 ntBASIC14.95□□□□□ -0.02
LDB3O75112 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
LDB3O75112 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
LDB3O75112 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
LDB3O75112 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LDB3O75112 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
LDB3O75112 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LDB3O75112 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC14.95□□□□□ -0.02
LDB3O75112 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
LDB3O75112 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
LDB3O75112 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LDB3O75112 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC14.95□□□□□ -0.02
LDB3O75112 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC14.95□□□□□ -0.02
LDB3O75112 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LDB3O75112 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LDB3O75112 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
LDB3O75112 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
LDB3O75112 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LDB3O75112 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC14.95□□□□□ -0.02
LDB3O75112 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC14.95□□□□□ -0.02
LDB3O75112 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC14.95□□□□□ -0.02
LDB3O75112 NME4-207ENST00000450036 985 ntTSL 3 BASIC14.95□□□□□ -0.02
LDB3O75112 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC14.95□□□□□ -0.02
LDB3O75112 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms