Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 AC004890.2-204ENST00000481968 304 ntBASIC15.21■□□□□ 0.03
LCMT2O60294 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC15.21■□□□□ 0.03
LCMT2O60294 AC093214.1-201ENST00000511688 1107 ntBASIC15.21■□□□□ 0.03
LCMT2O60294 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC15.21■□□□□ 0.03
LCMT2O60294 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC15.21■□□□□ 0.03
LCMT2O60294 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC15.21■□□□□ 0.03
LCMT2O60294 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LCMT2O60294 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC15.21■□□□□ 0.03
LCMT2O60294 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LCMT2O60294 ABR-203ENST00000536794 2213 ntTSL 2 BASIC15.21■□□□□ 0.03
LCMT2O60294 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LCMT2O60294 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LCMT2O60294 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LCMT2O60294 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
LCMT2O60294 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
LCMT2O60294 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.02
LCMT2O60294 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
LCMT2O60294 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
LCMT2O60294 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LCMT2O60294 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC15.2■□□□□ 0.02
LCMT2O60294 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
LCMT2O60294 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LCMT2O60294 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC15.2■□□□□ 0.02
LCMT2O60294 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LCMT2O60294 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LCMT2O60294 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LCMT2O60294 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LCMT2O60294 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LCMT2O60294 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
LCMT2O60294 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LCMT2O60294 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LCMT2O60294 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LCMT2O60294 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC15.2■□□□□ 0.02
LCMT2O60294 RAC2-202ENST00000401529 569 ntTSL 4 BASIC15.2■□□□□ 0.02
LCMT2O60294 RAD18-204ENST00000418463 563 ntTSL 4 BASIC15.2■□□□□ 0.02
LCMT2O60294 AC136604.1-201ENST00000418535 575 ntBASIC15.2■□□□□ 0.02
LCMT2O60294 RAD18-205ENST00000421052 582 ntTSL 3 BASIC15.2■□□□□ 0.02
LCMT2O60294 MDH2-205ENST00000461263 648 ntTSL 2 BASIC15.2■□□□□ 0.02
LCMT2O60294 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC15.2■□□□□ 0.02
LCMT2O60294 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC15.2■□□□□ 0.02
LCMT2O60294 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC15.2■□□□□ 0.02
LCMT2O60294 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LCMT2O60294 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LCMT2O60294 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC15.2■□□□□ 0.02
LCMT2O60294 AC044860.1-202ENST00000559481 777 ntBASIC15.2■□□□□ 0.02
LCMT2O60294 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC15.2■□□□□ 0.02
LCMT2O60294 AC025048.3-201ENST00000590609 569 ntBASIC15.2■□□□□ 0.02
LCMT2O60294 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LCMT2O60294 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
LCMT2O60294 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC15.2■□□□□ 0.02
LCMT2O60294 AC005702.4-201ENST00000618393 416 ntBASIC15.2■□□□□ 0.02
LCMT2O60294 RAB34-223ENST00000636154 730 ntTSL 2 BASIC15.2■□□□□ 0.02
LCMT2O60294 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
LCMT2O60294 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
LCMT2O60294 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC15.2■□□□□ 0.02
LCMT2O60294 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LCMT2O60294 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC15.2■□□□□ 0.02
LCMT2O60294 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
LCMT2O60294 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
LCMT2O60294 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LCMT2O60294 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC15.2■□□□□ 0.02
LCMT2O60294 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC15.2■□□□□ 0.02
LCMT2O60294 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LCMT2O60294 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LCMT2O60294 F11R-206ENST00000621309 4770 ntTSL 5 BASIC15.2■□□□□ 0.02
LCMT2O60294 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LCMT2O60294 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LCMT2O60294 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LCMT2O60294 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LCMT2O60294 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC15.19■□□□□ 0.02
LCMT2O60294 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC15.19■□□□□ 0.02
LCMT2O60294 AC092127.1-201ENST00000567093 3455 ntBASIC15.19■□□□□ 0.02
LCMT2O60294 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
LCMT2O60294 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
LCMT2O60294 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
LCMT2O60294 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC15.19■□□□□ 0.02
LCMT2O60294 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC15.19■□□□□ 0.02
LCMT2O60294 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC15.19■□□□□ 0.02
LCMT2O60294 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC15.19■□□□□ 0.02
LCMT2O60294 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC15.19■□□□□ 0.02
LCMT2O60294 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC15.19■□□□□ 0.02
LCMT2O60294 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC15.19■□□□□ 0.02
LCMT2O60294 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
LCMT2O60294 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
LCMT2O60294 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LCMT2O60294 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LCMT2O60294 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC15.19■□□□□ 0.02
LCMT2O60294 MIR770-201ENST00000390219 98 ntBASIC15.19■□□□□ 0.02
LCMT2O60294 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC15.19■□□□□ 0.02
LCMT2O60294 AC009477.1-201ENST00000452936 217 ntBASIC15.19■□□□□ 0.02
LCMT2O60294 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC15.19■□□□□ 0.02
LCMT2O60294 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC15.19■□□□□ 0.02
LCMT2O60294 RN7SL618P-201ENST00000477850 296 ntBASIC15.19■□□□□ 0.02
LCMT2O60294 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LCMT2O60294 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC15.19■□□□□ 0.02
LCMT2O60294 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC15.19■□□□□ 0.02
LCMT2O60294 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC15.19■□□□□ 0.02
LCMT2O60294 AC009407.1-201ENST00000568958 598 ntBASIC15.19■□□□□ 0.02
LCMT2O60294 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC15.19■□□□□ 0.02
LCMT2O60294 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms