Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 SSR4P1-203ENST00000599569 2260 ntBASIC12□□□□□ -0.49
SNAI2O43623 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC12□□□□□ -0.49
SNAI2O43623 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC12□□□□□ -0.49
SNAI2O43623 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
SNAI2O43623 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC12□□□□□ -0.49
SNAI2O43623 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
SNAI2O43623 TNN-203ENST00000622870 3719 ntTSL 5 BASIC12□□□□□ -0.49
SNAI2O43623 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC12□□□□□ -0.49
SNAI2O43623 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SNAI2O43623 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SNAI2O43623 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
SNAI2O43623 AC005622.1-201ENST00000636801 1703 ntBASIC12□□□□□ -0.49
SNAI2O43623 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC12□□□□□ -0.49
SNAI2O43623 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC12□□□□□ -0.49
SNAI2O43623 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
SNAI2O43623 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SNAI2O43623 RGS12-202ENST00000338806 3010 ntTSL 1 (best) BASIC12□□□□□ -0.49
SNAI2O43623 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC12□□□□□ -0.49
SNAI2O43623 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC12□□□□□ -0.49
SNAI2O43623 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
SNAI2O43623 U82695.1-201ENST00000635752 1889 ntBASIC12□□□□□ -0.49
SNAI2O43623 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC11.99□□□□□ -0.49
SNAI2O43623 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
SNAI2O43623 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC11.99□□□□□ -0.49
SNAI2O43623 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
SNAI2O43623 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
SNAI2O43623 AL137784.3-201ENST00000623858 2288 ntBASIC11.99□□□□□ -0.49
SNAI2O43623 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SNAI2O43623 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SNAI2O43623 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC11.99□□□□□ -0.49
SNAI2O43623 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
SNAI2O43623 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
SNAI2O43623 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SNAI2O43623 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
SNAI2O43623 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SNAI2O43623 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC11.99□□□□□ -0.49
SNAI2O43623 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SNAI2O43623 COCH-203ENST00000460581 2688 ntTSL 2 BASIC11.99□□□□□ -0.49
SNAI2O43623 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
SNAI2O43623 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
SNAI2O43623 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC11.99□□□□□ -0.49
SNAI2O43623 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SNAI2O43623 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SNAI2O43623 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC11.99□□□□□ -0.49
SNAI2O43623 DPM2-202ENST00000373110 738 ntTSL 2 BASIC11.99□□□□□ -0.49
SNAI2O43623 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC11.99□□□□□ -0.49
SNAI2O43623 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC11.99□□□□□ -0.49
SNAI2O43623 AC132008.2-207ENST00000454517 770 ntBASIC11.99□□□□□ -0.49
SNAI2O43623 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC11.99□□□□□ -0.49
SNAI2O43623 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC11.99□□□□□ -0.49
SNAI2O43623 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC11.99□□□□□ -0.49
SNAI2O43623 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SNAI2O43623 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC11.99□□□□□ -0.49
SNAI2O43623 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC11.99□□□□□ -0.49
SNAI2O43623 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC11.99□□□□□ -0.49
SNAI2O43623 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
SNAI2O43623 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC11.99□□□□□ -0.49
SNAI2O43623 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC11.99□□□□□ -0.49
SNAI2O43623 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC11.99□□□□□ -0.49
SNAI2O43623 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
SNAI2O43623 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC11.99□□□□□ -0.49
SNAI2O43623 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SNAI2O43623 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SNAI2O43623 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SNAI2O43623 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
SNAI2O43623 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SNAI2O43623 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
SNAI2O43623 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC11.99□□□□□ -0.49
SNAI2O43623 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
SNAI2O43623 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC11.99□□□□□ -0.49
SNAI2O43623 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SNAI2O43623 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SNAI2O43623 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
SNAI2O43623 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
SNAI2O43623 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
SNAI2O43623 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SNAI2O43623 AC067750.1-201ENST00000608826 6545 ntBASIC11.99□□□□□ -0.49
SNAI2O43623 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
SNAI2O43623 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC11.98□□□□□ -0.49
SNAI2O43623 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SNAI2O43623 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
SNAI2O43623 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC11.98□□□□□ -0.49
SNAI2O43623 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
SNAI2O43623 LINC00926-202ENST00000502027 2141 ntTSL 2 BASIC11.98□□□□□ -0.49
SNAI2O43623 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
SNAI2O43623 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC11.98□□□□□ -0.49
SNAI2O43623 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
SNAI2O43623 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SNAI2O43623 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SNAI2O43623 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SNAI2O43623 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
SNAI2O43623 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
SNAI2O43623 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
SNAI2O43623 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SNAI2O43623 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC11.98□□□□□ -0.49
SNAI2O43623 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC11.98□□□□□ -0.49
SNAI2O43623 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC11.98□□□□□ -0.49
SNAI2O43623 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
SNAI2O43623 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SNAI2O43623 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms