Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 UXT-AS1-201ENST00000590504 1525 ntBASIC14.17□□□□□ -0.14
SGCEO43556 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC14.17□□□□□ -0.14
SGCEO43556 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SGCEO43556 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC14.17□□□□□ -0.14
SGCEO43556 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SGCEO43556 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC14.17□□□□□ -0.14
SGCEO43556 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SGCEO43556 AL592309.1-201ENST00000443127 649 ntBASIC14.17□□□□□ -0.14
SGCEO43556 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC14.17□□□□□ -0.14
SGCEO43556 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SGCEO43556 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC14.17□□□□□ -0.14
SGCEO43556 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC14.17□□□□□ -0.14
SGCEO43556 RNA5SP410-201ENST00000516285 106 ntBASIC14.17□□□□□ -0.14
SGCEO43556 PUS1-205ENST00000535067 838 ntTSL 3 BASIC14.17□□□□□ -0.14
SGCEO43556 AP000842.3-202ENST00000569238 1080 ntBASIC14.17□□□□□ -0.14
SGCEO43556 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC14.17□□□□□ -0.14
SGCEO43556 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SGCEO43556 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC14.17□□□□□ -0.14
SGCEO43556 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC14.17□□□□□ -0.14
SGCEO43556 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC14.17□□□□□ -0.14
SGCEO43556 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
SGCEO43556 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC14.17□□□□□ -0.14
SGCEO43556 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
SGCEO43556 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC14.17□□□□□ -0.14
SGCEO43556 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SGCEO43556 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
SGCEO43556 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SGCEO43556 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC14.17□□□□□ -0.14
SGCEO43556 AC112504.1-201ENST00000623415 1841 ntBASIC14.17□□□□□ -0.14
SGCEO43556 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC14.17□□□□□ -0.14
SGCEO43556 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
SGCEO43556 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SGCEO43556 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC14.17□□□□□ -0.14
SGCEO43556 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SGCEO43556 ACE-203ENST00000413513 2237 ntTSL 2 BASIC14.17□□□□□ -0.14
SGCEO43556 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SGCEO43556 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SGCEO43556 AL122018.1-201ENST00000446607 2310 ntBASIC14.16□□□□□ -0.14
SGCEO43556 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
SGCEO43556 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
SGCEO43556 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SGCEO43556 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SGCEO43556 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SGCEO43556 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
SGCEO43556 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
SGCEO43556 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SGCEO43556 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC14.16□□□□□ -0.14
SGCEO43556 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SGCEO43556 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SGCEO43556 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SGCEO43556 PTMS-202ENST00000389462 773 ntTSL 2 BASIC14.16□□□□□ -0.14
SGCEO43556 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC14.16□□□□□ -0.14
SGCEO43556 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SGCEO43556 CCND1-203ENST00000536559 553 ntTSL 3 BASIC14.16□□□□□ -0.14
SGCEO43556 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SGCEO43556 LINC01225-203ENST00000563550 1244 ntBASIC14.16□□□□□ -0.14
SGCEO43556 AC010327.4-202ENST00000591484 748 ntBASIC14.16□□□□□ -0.14
SGCEO43556 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC14.16□□□□□ -0.14
SGCEO43556 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
SGCEO43556 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SGCEO43556 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SGCEO43556 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC14.16□□□□□ -0.14
SGCEO43556 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
SGCEO43556 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SGCEO43556 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SGCEO43556 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SGCEO43556 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SGCEO43556 AC008677.1-201ENST00000519230 1561 ntBASIC14.16□□□□□ -0.14
SGCEO43556 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SGCEO43556 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
SGCEO43556 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
SGCEO43556 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC14.16□□□□□ -0.14
SGCEO43556 MIR600HG-201ENST00000449175 5984 ntBASIC14.16□□□□□ -0.14
SGCEO43556 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
SGCEO43556 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
SGCEO43556 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SGCEO43556 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC14.15□□□□□ -0.14
SGCEO43556 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC14.15□□□□□ -0.14
SGCEO43556 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14.15□□□□□ -0.14
SGCEO43556 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC14.15□□□□□ -0.14
SGCEO43556 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
SGCEO43556 AC104640.1-201ENST00000562617 2109 ntBASIC14.15□□□□□ -0.14
SGCEO43556 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
SGCEO43556 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SGCEO43556 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC14.15□□□□□ -0.14
SGCEO43556 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SGCEO43556 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SGCEO43556 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SGCEO43556 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SGCEO43556 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
SGCEO43556 AC144831.1-201ENST00000573312 2656 ntBASIC14.15□□□□□ -0.14
SGCEO43556 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SGCEO43556 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
SGCEO43556 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
SGCEO43556 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
SGCEO43556 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SGCEO43556 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SGCEO43556 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC14.15□□□□□ -0.14
SGCEO43556 MIR346-201ENST00000362234 95 ntBASIC14.15□□□□□ -0.14
SGCEO43556 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms