Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC13.89□□□□□ -0.19
XRCC2O43543 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
XRCC2O43543 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC13.89□□□□□ -0.19
XRCC2O43543 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
XRCC2O43543 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
XRCC2O43543 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC13.88□□□□□ -0.19
XRCC2O43543 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
XRCC2O43543 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
XRCC2O43543 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC13.88□□□□□ -0.19
XRCC2O43543 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC13.88□□□□□ -0.19
XRCC2O43543 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
XRCC2O43543 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
XRCC2O43543 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC13.88□□□□□ -0.19
XRCC2O43543 AP3S2-216ENST00000617003 1561 ntBASIC13.88□□□□□ -0.19
XRCC2O43543 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC13.88□□□□□ -0.19
XRCC2O43543 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
XRCC2O43543 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC13.88□□□□□ -0.19
XRCC2O43543 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC13.88□□□□□ -0.19
XRCC2O43543 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
XRCC2O43543 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
XRCC2O43543 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC13.88□□□□□ -0.19
XRCC2O43543 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
XRCC2O43543 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
XRCC2O43543 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
XRCC2O43543 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
XRCC2O43543 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
XRCC2O43543 BX842568.4-201ENST00000421222 227 ntBASIC13.88□□□□□ -0.19
XRCC2O43543 KRT18P32-201ENST00000424695 1287 ntBASIC13.88□□□□□ -0.19
XRCC2O43543 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC13.88□□□□□ -0.19
XRCC2O43543 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC13.88□□□□□ -0.19
XRCC2O43543 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
XRCC2O43543 AP000344.2-201ENST00000512987 629 ntBASIC13.88□□□□□ -0.19
XRCC2O43543 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC13.88□□□□□ -0.19
XRCC2O43543 RARRES2P9-201ENST00000565168 469 ntBASIC13.88□□□□□ -0.19
XRCC2O43543 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
XRCC2O43543 MIR4469-201ENST00000583919 79 ntBASIC13.88□□□□□ -0.19
XRCC2O43543 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
XRCC2O43543 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC13.88□□□□□ -0.19
XRCC2O43543 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC13.88□□□□□ -0.19
XRCC2O43543 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC13.88□□□□□ -0.19
XRCC2O43543 AL513210.1-201ENST00000629608 234 ntBASIC13.88□□□□□ -0.19
XRCC2O43543 LOX-206ENST00000639739 1626 ntTSL 5 BASIC13.88□□□□□ -0.19
XRCC2O43543 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
XRCC2O43543 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
XRCC2O43543 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC13.88□□□□□ -0.19
XRCC2O43543 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
XRCC2O43543 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
XRCC2O43543 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
XRCC2O43543 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
XRCC2O43543 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC13.88□□□□□ -0.19
XRCC2O43543 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
XRCC2O43543 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
XRCC2O43543 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
XRCC2O43543 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
XRCC2O43543 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
XRCC2O43543 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC13.88□□□□□ -0.19
XRCC2O43543 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
XRCC2O43543 DKFZP434H168-201ENST00000567381 1905 ntBASIC13.88□□□□□ -0.19
XRCC2O43543 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
XRCC2O43543 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
XRCC2O43543 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
XRCC2O43543 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
XRCC2O43543 MIR600HG-201ENST00000449175 5984 ntBASIC13.87□□□□□ -0.19
XRCC2O43543 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
XRCC2O43543 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
XRCC2O43543 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
XRCC2O43543 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
XRCC2O43543 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
XRCC2O43543 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
XRCC2O43543 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
XRCC2O43543 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
XRCC2O43543 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC13.87□□□□□ -0.19
XRCC2O43543 AC007326.2-201ENST00000624224 7579 ntBASIC13.87□□□□□ -0.19
XRCC2O43543 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
XRCC2O43543 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
XRCC2O43543 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
XRCC2O43543 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
XRCC2O43543 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
XRCC2O43543 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
XRCC2O43543 AL353705.2-201ENST00000428243 662 ntBASIC13.87□□□□□ -0.19
XRCC2O43543 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC13.87□□□□□ -0.19
XRCC2O43543 MDH2-205ENST00000461263 648 ntTSL 2 BASIC13.87□□□□□ -0.19
XRCC2O43543 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC13.87□□□□□ -0.19
XRCC2O43543 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC13.87□□□□□ -0.19
XRCC2O43543 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC13.87□□□□□ -0.19
XRCC2O43543 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC13.87□□□□□ -0.19
XRCC2O43543 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC13.87□□□□□ -0.19
XRCC2O43543 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
XRCC2O43543 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
XRCC2O43543 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC13.87□□□□□ -0.19
XRCC2O43543 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
XRCC2O43543 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
XRCC2O43543 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
XRCC2O43543 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC13.87□□□□□ -0.19
XRCC2O43543 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC13.87□□□□□ -0.19
XRCC2O43543 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
XRCC2O43543 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC13.87□□□□□ -0.19
XRCC2O43543 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
XRCC2O43543 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
XRCC2O43543 AL161772.1-201ENST00000610494 4412 ntBASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms