Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC13.88□□□□□ -0.19
SHISA3A0PJX4 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC13.88□□□□□ -0.19
SHISA3A0PJX4 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SHISA3A0PJX4 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC13.88□□□□□ -0.19
SHISA3A0PJX4 AC004790.2-201ENST00000623588 572 ntBASIC13.88□□□□□ -0.19
SHISA3A0PJX4 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC13.88□□□□□ -0.19
SHISA3A0PJX4 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC13.88□□□□□ -0.19
SHISA3A0PJX4 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC13.88□□□□□ -0.19
SHISA3A0PJX4 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SHISA3A0PJX4 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
SHISA3A0PJX4 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SHISA3A0PJX4 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SHISA3A0PJX4 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC13.88□□□□□ -0.19
SHISA3A0PJX4 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SHISA3A0PJX4 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
SHISA3A0PJX4 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC13.88□□□□□ -0.19
SHISA3A0PJX4 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC13.88□□□□□ -0.19
SHISA3A0PJX4 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SHISA3A0PJX4 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC13.88□□□□□ -0.19
SHISA3A0PJX4 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SHISA3A0PJX4 BX640514.1-201ENST00000583223 1918 ntBASIC13.88□□□□□ -0.19
SHISA3A0PJX4 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
SHISA3A0PJX4 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC13.88□□□□□ -0.19
SHISA3A0PJX4 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
SHISA3A0PJX4 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SHISA3A0PJX4 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SHISA3A0PJX4 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
SHISA3A0PJX4 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC13.87□□□□□ -0.19
SHISA3A0PJX4 REXO1L1P-202ENST00000608646 1974 ntBASIC13.87□□□□□ -0.19
SHISA3A0PJX4 AC027601.5-201ENST00000624065 2482 ntBASIC13.87□□□□□ -0.19
SHISA3A0PJX4 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SHISA3A0PJX4 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
SHISA3A0PJX4 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SHISA3A0PJX4 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC13.87□□□□□ -0.19
SHISA3A0PJX4 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SHISA3A0PJX4 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SHISA3A0PJX4 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SHISA3A0PJX4 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
SHISA3A0PJX4 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SHISA3A0PJX4 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SHISA3A0PJX4 AKR1C7P-201ENST00000305623 895 ntBASIC13.87□□□□□ -0.19
SHISA3A0PJX4 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
SHISA3A0PJX4 SCARNA2-201ENST00000458748 420 ntBASIC13.87□□□□□ -0.19
SHISA3A0PJX4 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC13.87□□□□□ -0.19
SHISA3A0PJX4 FHL2-212ENST00000607522 759 ntTSL 2 BASIC13.87□□□□□ -0.19
SHISA3A0PJX4 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
SHISA3A0PJX4 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC13.87□□□□□ -0.19
SHISA3A0PJX4 OS9-207ENST00000439210 1946 ntTSL 2 BASIC13.87□□□□□ -0.19
SHISA3A0PJX4 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC13.87□□□□□ -0.19
SHISA3A0PJX4 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
SHISA3A0PJX4 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC13.87□□□□□ -0.19
SHISA3A0PJX4 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SHISA3A0PJX4 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
SHISA3A0PJX4 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SHISA3A0PJX4 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
SHISA3A0PJX4 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SHISA3A0PJX4 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
SHISA3A0PJX4 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SHISA3A0PJX4 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
SHISA3A0PJX4 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC13.87□□□□□ -0.19
SHISA3A0PJX4 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
SHISA3A0PJX4 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SHISA3A0PJX4 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SHISA3A0PJX4 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
SHISA3A0PJX4 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
SHISA3A0PJX4 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
SHISA3A0PJX4 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SHISA3A0PJX4 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC13.87□□□□□ -0.19
SHISA3A0PJX4 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
SHISA3A0PJX4 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SHISA3A0PJX4 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
SHISA3A0PJX4 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SHISA3A0PJX4 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
SHISA3A0PJX4 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SHISA3A0PJX4 PPP1R26P4-201ENST00000619065 3527 ntBASIC13.86□□□□□ -0.19
SHISA3A0PJX4 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SHISA3A0PJX4 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC13.86□□□□□ -0.19
SHISA3A0PJX4 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC13.86□□□□□ -0.19
SHISA3A0PJX4 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC13.86□□□□□ -0.19
SHISA3A0PJX4 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SHISA3A0PJX4 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
SHISA3A0PJX4 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC13.86□□□□□ -0.19
SHISA3A0PJX4 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC13.86□□□□□ -0.19
SHISA3A0PJX4 AC015656.1-201ENST00000624209 3578 ntBASIC13.86□□□□□ -0.19
SHISA3A0PJX4 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC13.86□□□□□ -0.19
SHISA3A0PJX4 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC13.86□□□□□ -0.19
SHISA3A0PJX4 ZBTB45P2-201ENST00000452245 1531 ntBASIC13.86□□□□□ -0.19
SHISA3A0PJX4 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
SHISA3A0PJX4 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SHISA3A0PJX4 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SHISA3A0PJX4 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
SHISA3A0PJX4 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SHISA3A0PJX4 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC13.86□□□□□ -0.19
SHISA3A0PJX4 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SHISA3A0PJX4 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SHISA3A0PJX4 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
SHISA3A0PJX4 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SHISA3A0PJX4 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SHISA3A0PJX4 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SHISA3A0PJX4 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms