Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHGC3Q9UN70 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC16.74■□□□□ 0.27
PCDHGC3Q9UN70 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHGC3Q9UN70 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHGC3Q9UN70 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHGC3Q9UN70 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC16.74■□□□□ 0.27
PCDHGC3Q9UN70 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHGC3Q9UN70 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHGC3Q9UN70 AC092384.3-202ENST00000564646 2873 ntBASIC16.74■□□□□ 0.27
PCDHGC3Q9UN70 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC16.74■□□□□ 0.27
PCDHGC3Q9UN70 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHGC3Q9UN70 AC100757.3-201ENST00000622361 1406 ntBASIC16.74■□□□□ 0.27
PCDHGC3Q9UN70 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC16.74■□□□□ 0.27
PCDHGC3Q9UN70 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHGC3Q9UN70 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
PCDHGC3Q9UN70 LCK-206ENST00000373564 2137 ntTSL 5 BASIC16.74■□□□□ 0.27
PCDHGC3Q9UN70 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHGC3Q9UN70 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHGC3Q9UN70 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC16.74■□□□□ 0.27
PCDHGC3Q9UN70 MIR943-201ENST00000401286 94 ntBASIC16.74■□□□□ 0.27
PCDHGC3Q9UN70 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC16.74■□□□□ 0.27
PCDHGC3Q9UN70 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC16.74■□□□□ 0.27
PCDHGC3Q9UN70 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC16.74■□□□□ 0.27
PCDHGC3Q9UN70 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC16.74■□□□□ 0.27
PCDHGC3Q9UN70 DUX4L27-201ENST00000554796 1261 ntBASIC16.74■□□□□ 0.27
PCDHGC3Q9UN70 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC16.74■□□□□ 0.27
PCDHGC3Q9UN70 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHGC3Q9UN70 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHGC3Q9UN70 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC16.74■□□□□ 0.27
PCDHGC3Q9UN70 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC16.74■□□□□ 0.27
PCDHGC3Q9UN70 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
PCDHGC3Q9UN70 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHGC3Q9UN70 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC16.74■□□□□ 0.27
PCDHGC3Q9UN70 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC16.74■□□□□ 0.27
PCDHGC3Q9UN70 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHGC3Q9UN70 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHGC3Q9UN70 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHGC3Q9UN70 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHGC3Q9UN70 AC136621.1-201ENST00000624017 2304 ntBASIC16.74■□□□□ 0.27
PCDHGC3Q9UN70 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHGC3Q9UN70 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHGC3Q9UN70 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHGC3Q9UN70 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGC3Q9UN70 AC087481.3-201ENST00000602886 1894 ntBASIC16.73■□□□□ 0.27
PCDHGC3Q9UN70 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
PCDHGC3Q9UN70 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
PCDHGC3Q9UN70 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGC3Q9UN70 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGC3Q9UN70 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC16.73■□□□□ 0.27
PCDHGC3Q9UN70 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGC3Q9UN70 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.73■□□□□ 0.27
PCDHGC3Q9UN70 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC16.73■□□□□ 0.27
PCDHGC3Q9UN70 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGC3Q9UN70 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
PCDHGC3Q9UN70 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGC3Q9UN70 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGC3Q9UN70 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGC3Q9UN70 VMA21-202ENST00000370361 693 ntTSL 5 BASIC16.73■□□□□ 0.27
PCDHGC3Q9UN70 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGC3Q9UN70 PNMT-202ENST00000394246 821 ntTSL 2 BASIC16.73■□□□□ 0.27
PCDHGC3Q9UN70 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC16.73■□□□□ 0.27
PCDHGC3Q9UN70 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC16.73■□□□□ 0.27
PCDHGC3Q9UN70 TSSK5P-201ENST00000423978 907 ntBASIC16.73■□□□□ 0.27
PCDHGC3Q9UN70 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC16.73■□□□□ 0.27
PCDHGC3Q9UN70 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC16.73■□□□□ 0.27
PCDHGC3Q9UN70 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC16.73■□□□□ 0.27
PCDHGC3Q9UN70 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC16.73■□□□□ 0.27
PCDHGC3Q9UN70 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC16.73■□□□□ 0.27
PCDHGC3Q9UN70 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC16.73■□□□□ 0.27
PCDHGC3Q9UN70 HADH-212ENST00000638621 741 ntTSL 5 BASIC16.73■□□□□ 0.27
PCDHGC3Q9UN70 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGC3Q9UN70 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGC3Q9UN70 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.73■□□□□ 0.27
PCDHGC3Q9UN70 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC16.73■□□□□ 0.27
PCDHGC3Q9UN70 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
PCDHGC3Q9UN70 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGC3Q9UN70 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGC3Q9UN70 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGC3Q9UN70 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGC3Q9UN70 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGC3Q9UN70 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHGC3Q9UN70 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC16.73■□□□□ 0.27
PCDHGC3Q9UN70 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
PCDHGC3Q9UN70 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC16.72■□□□□ 0.27
PCDHGC3Q9UN70 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGC3Q9UN70 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGC3Q9UN70 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
PCDHGC3Q9UN70 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGC3Q9UN70 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.72■□□□□ 0.27
PCDHGC3Q9UN70 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
PCDHGC3Q9UN70 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
PCDHGC3Q9UN70 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC16.72■□□□□ 0.27
PCDHGC3Q9UN70 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGC3Q9UN70 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGC3Q9UN70 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGC3Q9UN70 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGC3Q9UN70 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGC3Q9UN70 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGC3Q9UN70 GGCT-205ENST00000409436 954 ntTSL 3 BASIC16.72■□□□□ 0.27
PCDHGC3Q9UN70 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 69.2 ms