Protein–RNA interactions for Protein: Q9UBT3

DKK4, Dickkopf-related protein 4, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK4Q9UBT3 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
DKK4Q9UBT3 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC14.6□□□□□ -0.07
DKK4Q9UBT3 AL603756.1-201ENST00000606511 2163 ntBASIC14.6□□□□□ -0.07
DKK4Q9UBT3 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
DKK4Q9UBT3 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
DKK4Q9UBT3 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
DKK4Q9UBT3 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
DKK4Q9UBT3 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
DKK4Q9UBT3 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
DKK4Q9UBT3 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
DKK4Q9UBT3 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
DKK4Q9UBT3 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
DKK4Q9UBT3 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC14.59□□□□□ -0.07
DKK4Q9UBT3 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
DKK4Q9UBT3 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
DKK4Q9UBT3 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC14.59□□□□□ -0.07
DKK4Q9UBT3 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC14.59□□□□□ -0.07
DKK4Q9UBT3 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
DKK4Q9UBT3 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
DKK4Q9UBT3 TP73-209ENST00000603362 1668 ntTSL 5 BASIC14.59□□□□□ -0.07
DKK4Q9UBT3 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
DKK4Q9UBT3 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
DKK4Q9UBT3 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC14.59□□□□□ -0.07
DKK4Q9UBT3 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
DKK4Q9UBT3 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
DKK4Q9UBT3 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC14.59□□□□□ -0.07
DKK4Q9UBT3 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
DKK4Q9UBT3 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
DKK4Q9UBT3 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
DKK4Q9UBT3 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
DKK4Q9UBT3 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC14.59□□□□□ -0.07
DKK4Q9UBT3 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
DKK4Q9UBT3 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
DKK4Q9UBT3 AC006335.1-201ENST00000445200 547 ntBASIC14.59□□□□□ -0.07
DKK4Q9UBT3 AC098935.1-201ENST00000446057 611 ntBASIC14.59□□□□□ -0.07
DKK4Q9UBT3 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC14.59□□□□□ -0.07
DKK4Q9UBT3 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC14.59□□□□□ -0.07
DKK4Q9UBT3 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC14.59□□□□□ -0.07
DKK4Q9UBT3 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC14.59□□□□□ -0.07
DKK4Q9UBT3 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
DKK4Q9UBT3 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC14.59□□□□□ -0.07
DKK4Q9UBT3 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
DKK4Q9UBT3 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
DKK4Q9UBT3 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
DKK4Q9UBT3 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
DKK4Q9UBT3 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
DKK4Q9UBT3 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
DKK4Q9UBT3 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
DKK4Q9UBT3 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
DKK4Q9UBT3 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
DKK4Q9UBT3 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
DKK4Q9UBT3 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
DKK4Q9UBT3 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC14.58□□□□□ -0.08
DKK4Q9UBT3 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
DKK4Q9UBT3 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
DKK4Q9UBT3 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.08
DKK4Q9UBT3 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
DKK4Q9UBT3 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
DKK4Q9UBT3 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
DKK4Q9UBT3 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
DKK4Q9UBT3 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC14.58□□□□□ -0.08
DKK4Q9UBT3 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
DKK4Q9UBT3 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC14.58□□□□□ -0.08
DKK4Q9UBT3 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC14.58□□□□□ -0.08
DKK4Q9UBT3 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC14.58□□□□□ -0.08
DKK4Q9UBT3 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
DKK4Q9UBT3 RNF41-210ENST00000552244 716 ntTSL 3 BASIC14.58□□□□□ -0.08
DKK4Q9UBT3 SYT17-208ENST00000568433 812 ntTSL 3 BASIC14.58□□□□□ -0.08
DKK4Q9UBT3 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC14.58□□□□□ -0.08
DKK4Q9UBT3 CENPX-208ENST00000584347 799 ntTSL 2 BASIC14.58□□□□□ -0.08
DKK4Q9UBT3 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC14.58□□□□□ -0.08
DKK4Q9UBT3 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
DKK4Q9UBT3 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC14.58□□□□□ -0.08
DKK4Q9UBT3 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC14.58□□□□□ -0.08
DKK4Q9UBT3 AC097359.3-201ENST00000603982 1210 ntBASIC14.58□□□□□ -0.08
DKK4Q9UBT3 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
DKK4Q9UBT3 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC14.58□□□□□ -0.08
DKK4Q9UBT3 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
DKK4Q9UBT3 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
DKK4Q9UBT3 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
DKK4Q9UBT3 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
DKK4Q9UBT3 OS9-205ENST00000413095 1660 ntTSL 2 BASIC14.58□□□□□ -0.08
DKK4Q9UBT3 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC14.58□□□□□ -0.08
DKK4Q9UBT3 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
DKK4Q9UBT3 AC106820.2-201ENST00000563775 3264 ntBASIC14.58□□□□□ -0.08
DKK4Q9UBT3 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
DKK4Q9UBT3 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
DKK4Q9UBT3 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
DKK4Q9UBT3 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
DKK4Q9UBT3 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC14.57□□□□□ -0.08
DKK4Q9UBT3 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC14.57□□□□□ -0.08
DKK4Q9UBT3 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
DKK4Q9UBT3 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC14.57□□□□□ -0.08
DKK4Q9UBT3 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
DKK4Q9UBT3 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC14.57□□□□□ -0.08
DKK4Q9UBT3 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
DKK4Q9UBT3 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
DKK4Q9UBT3 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC14.57□□□□□ -0.08
DKK4Q9UBT3 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
DKK4Q9UBT3 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms