Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
PPARGC1AQ9UBK2 AC104640.1-201ENST00000562617 2109 ntBASIC16.64■□□□□ 0.25
PPARGC1AQ9UBK2 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PPARGC1AQ9UBK2 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PPARGC1AQ9UBK2 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
PPARGC1AQ9UBK2 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PPARGC1AQ9UBK2 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PPARGC1AQ9UBK2 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
PPARGC1AQ9UBK2 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
PPARGC1AQ9UBK2 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PPARGC1AQ9UBK2 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
PPARGC1AQ9UBK2 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PPARGC1AQ9UBK2 PNMT-202ENST00000394246 821 ntTSL 2 BASIC16.64■□□□□ 0.25
PPARGC1AQ9UBK2 WRB-204ENST00000398753 699 ntTSL 3 BASIC16.64■□□□□ 0.25
PPARGC1AQ9UBK2 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
PPARGC1AQ9UBK2 FAM86GP-201ENST00000448322 971 ntBASIC16.64■□□□□ 0.25
PPARGC1AQ9UBK2 PPP6R2P1-201ENST00000450880 1275 ntBASIC16.64■□□□□ 0.25
PPARGC1AQ9UBK2 KLF2P3-201ENST00000451977 1087 ntBASIC16.64■□□□□ 0.25
PPARGC1AQ9UBK2 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PPARGC1AQ9UBK2 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC16.64■□□□□ 0.25
PPARGC1AQ9UBK2 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC16.64■□□□□ 0.25
PPARGC1AQ9UBK2 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC16.64■□□□□ 0.25
PPARGC1AQ9UBK2 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC16.64■□□□□ 0.25
PPARGC1AQ9UBK2 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC16.64■□□□□ 0.25
PPARGC1AQ9UBK2 RN7SL828P-201ENST00000607615 303 ntBASIC16.64■□□□□ 0.25
PPARGC1AQ9UBK2 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC16.64■□□□□ 0.25
PPARGC1AQ9UBK2 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PPARGC1AQ9UBK2 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.64■□□□□ 0.25
PPARGC1AQ9UBK2 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
PPARGC1AQ9UBK2 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
PPARGC1AQ9UBK2 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
PPARGC1AQ9UBK2 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PPARGC1AQ9UBK2 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.64■□□□□ 0.25
PPARGC1AQ9UBK2 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PPARGC1AQ9UBK2 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PPARGC1AQ9UBK2 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PPARGC1AQ9UBK2 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PPARGC1AQ9UBK2 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC16.64■□□□□ 0.25
PPARGC1AQ9UBK2 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PPARGC1AQ9UBK2 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.64■□□□□ 0.25
PPARGC1AQ9UBK2 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PPARGC1AQ9UBK2 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
PPARGC1AQ9UBK2 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PPARGC1AQ9UBK2 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PPARGC1AQ9UBK2 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
PPARGC1AQ9UBK2 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PPARGC1AQ9UBK2 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
PPARGC1AQ9UBK2 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PPARGC1AQ9UBK2 AL691432.1-201ENST00000596308 1422 ntBASIC16.63■□□□□ 0.25
PPARGC1AQ9UBK2 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC16.63■□□□□ 0.25
PPARGC1AQ9UBK2 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
PPARGC1AQ9UBK2 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC16.63■□□□□ 0.25
PPARGC1AQ9UBK2 GRAMD4P3-201ENST00000621665 1669 ntBASIC16.63■□□□□ 0.25
PPARGC1AQ9UBK2 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PPARGC1AQ9UBK2 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC16.63■□□□□ 0.25
PPARGC1AQ9UBK2 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC16.63■□□□□ 0.25
PPARGC1AQ9UBK2 AP001282.1-201ENST00000531301 1499 ntBASIC16.63■□□□□ 0.25
PPARGC1AQ9UBK2 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
PPARGC1AQ9UBK2 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
PPARGC1AQ9UBK2 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
PPARGC1AQ9UBK2 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PPARGC1AQ9UBK2 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PPARGC1AQ9UBK2 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PPARGC1AQ9UBK2 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
PPARGC1AQ9UBK2 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
PPARGC1AQ9UBK2 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PPARGC1AQ9UBK2 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
PPARGC1AQ9UBK2 RBM39-205ENST00000397370 612 ntTSL 2 BASIC16.63■□□□□ 0.25
PPARGC1AQ9UBK2 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PPARGC1AQ9UBK2 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC16.63■□□□□ 0.25
PPARGC1AQ9UBK2 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
PPARGC1AQ9UBK2 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC16.63■□□□□ 0.25
PPARGC1AQ9UBK2 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC16.63■□□□□ 0.25
PPARGC1AQ9UBK2 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PPARGC1AQ9UBK2 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC16.63■□□□□ 0.25
PPARGC1AQ9UBK2 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC16.63■□□□□ 0.25
PPARGC1AQ9UBK2 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC16.63■□□□□ 0.25
PPARGC1AQ9UBK2 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC16.63■□□□□ 0.25
PPARGC1AQ9UBK2 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC16.63■□□□□ 0.25
PPARGC1AQ9UBK2 AC140878.1-201ENST00000565277 250 ntBASIC16.63■□□□□ 0.25
PPARGC1AQ9UBK2 AL133215.2-201ENST00000609242 977 ntBASIC16.63■□□□□ 0.25
PPARGC1AQ9UBK2 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
PPARGC1AQ9UBK2 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
PPARGC1AQ9UBK2 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PPARGC1AQ9UBK2 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PPARGC1AQ9UBK2 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
PPARGC1AQ9UBK2 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PPARGC1AQ9UBK2 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PPARGC1AQ9UBK2 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PPARGC1AQ9UBK2 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
PPARGC1AQ9UBK2 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PPARGC1AQ9UBK2 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PPARGC1AQ9UBK2 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC16.63■□□□□ 0.25
PPARGC1AQ9UBK2 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PPARGC1AQ9UBK2 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PPARGC1AQ9UBK2 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PPARGC1AQ9UBK2 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC16.62■□□□□ 0.25
PPARGC1AQ9UBK2 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PPARGC1AQ9UBK2 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
PPARGC1AQ9UBK2 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms