Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NECTIN3Q9NQS3 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC15.34■□□□□ 0.05
NECTIN3Q9NQS3 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC15.34■□□□□ 0.05
NECTIN3Q9NQS3 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC15.33■□□□□ 0.05
NECTIN3Q9NQS3 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
NECTIN3Q9NQS3 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC15.33■□□□□ 0.05
NECTIN3Q9NQS3 AC013268.4-201ENST00000637413 2228 ntBASIC15.33■□□□□ 0.05
NECTIN3Q9NQS3 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC15.33■□□□□ 0.05
NECTIN3Q9NQS3 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC15.33■□□□□ 0.05
NECTIN3Q9NQS3 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
NECTIN3Q9NQS3 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
NECTIN3Q9NQS3 AL596087.1-201ENST00000400979 1969 ntBASIC15.33■□□□□ 0.05
NECTIN3Q9NQS3 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
NECTIN3Q9NQS3 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NECTIN3Q9NQS3 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC15.33■□□□□ 0.04
NECTIN3Q9NQS3 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
NECTIN3Q9NQS3 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
NECTIN3Q9NQS3 FAM220BP-201ENST00000377689 816 ntBASIC15.33■□□□□ 0.04
NECTIN3Q9NQS3 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC15.33■□□□□ 0.04
NECTIN3Q9NQS3 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NECTIN3Q9NQS3 SLBP-205ENST00000488267 987 ntTSL 2 BASIC15.33■□□□□ 0.04
NECTIN3Q9NQS3 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NECTIN3Q9NQS3 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
NECTIN3Q9NQS3 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC15.33■□□□□ 0.04
NECTIN3Q9NQS3 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
NECTIN3Q9NQS3 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC15.33■□□□□ 0.04
NECTIN3Q9NQS3 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
NECTIN3Q9NQS3 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NECTIN3Q9NQS3 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
NECTIN3Q9NQS3 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC15.33■□□□□ 0.04
NECTIN3Q9NQS3 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC15.33■□□□□ 0.04
NECTIN3Q9NQS3 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC15.32■□□□□ 0.04
NECTIN3Q9NQS3 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NECTIN3Q9NQS3 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NECTIN3Q9NQS3 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NECTIN3Q9NQS3 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC15.32■□□□□ 0.04
NECTIN3Q9NQS3 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
NECTIN3Q9NQS3 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC15.32■□□□□ 0.04
NECTIN3Q9NQS3 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC15.32■□□□□ 0.04
NECTIN3Q9NQS3 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC15.32■□□□□ 0.04
NECTIN3Q9NQS3 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
NECTIN3Q9NQS3 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
NECTIN3Q9NQS3 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NECTIN3Q9NQS3 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
NECTIN3Q9NQS3 HLA-H-201ENST00000383620 1096 ntBASIC15.32■□□□□ 0.04
NECTIN3Q9NQS3 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC15.32■□□□□ 0.04
NECTIN3Q9NQS3 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC15.32■□□□□ 0.04
NECTIN3Q9NQS3 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC15.32■□□□□ 0.04
NECTIN3Q9NQS3 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC15.32■□□□□ 0.04
NECTIN3Q9NQS3 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NECTIN3Q9NQS3 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC15.32■□□□□ 0.04
NECTIN3Q9NQS3 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NECTIN3Q9NQS3 RNA5SP410-201ENST00000516285 106 ntBASIC15.32■□□□□ 0.04
NECTIN3Q9NQS3 AL512356.2-201ENST00000546955 174 ntBASIC15.32■□□□□ 0.04
NECTIN3Q9NQS3 VPS29-207ENST00000549970 818 ntTSL 3 BASIC15.32■□□□□ 0.04
NECTIN3Q9NQS3 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
NECTIN3Q9NQS3 AC025678.2-201ENST00000562061 970 ntBASIC15.32■□□□□ 0.04
NECTIN3Q9NQS3 LSM12-202ENST00000585388 942 ntTSL 3 BASIC15.32■□□□□ 0.04
NECTIN3Q9NQS3 Z92544.3-201ENST00000624747 417 ntBASIC15.32■□□□□ 0.04
NECTIN3Q9NQS3 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NECTIN3Q9NQS3 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC15.32■□□□□ 0.04
NECTIN3Q9NQS3 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC15.32■□□□□ 0.04
NECTIN3Q9NQS3 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC15.32■□□□□ 0.04
NECTIN3Q9NQS3 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
NECTIN3Q9NQS3 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
NECTIN3Q9NQS3 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC15.32■□□□□ 0.04
NECTIN3Q9NQS3 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
NECTIN3Q9NQS3 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
NECTIN3Q9NQS3 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NECTIN3Q9NQS3 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
NECTIN3Q9NQS3 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC15.32■□□□□ 0.04
NECTIN3Q9NQS3 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
NECTIN3Q9NQS3 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NECTIN3Q9NQS3 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC15.31■□□□□ 0.04
NECTIN3Q9NQS3 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NECTIN3Q9NQS3 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC15.31■□□□□ 0.04
NECTIN3Q9NQS3 REXO1L8P-201ENST00000604378 1897 ntBASIC15.31■□□□□ 0.04
NECTIN3Q9NQS3 U82695.1-201ENST00000635752 1889 ntBASIC15.31■□□□□ 0.04
NECTIN3Q9NQS3 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
NECTIN3Q9NQS3 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NECTIN3Q9NQS3 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NECTIN3Q9NQS3 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NECTIN3Q9NQS3 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NECTIN3Q9NQS3 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NECTIN3Q9NQS3 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
NECTIN3Q9NQS3 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NECTIN3Q9NQS3 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NECTIN3Q9NQS3 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
NECTIN3Q9NQS3 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
NECTIN3Q9NQS3 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC15.31■□□□□ 0.04
NECTIN3Q9NQS3 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC15.31■□□□□ 0.04
NECTIN3Q9NQS3 AL645939.2-201ENST00000427340 991 ntBASIC15.31■□□□□ 0.04
NECTIN3Q9NQS3 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC15.31■□□□□ 0.04
NECTIN3Q9NQS3 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC15.31■□□□□ 0.04
NECTIN3Q9NQS3 AC069262.1-201ENST00000539058 672 ntBASIC15.31■□□□□ 0.04
NECTIN3Q9NQS3 RPL28-205ENST00000558131 444 ntTSL 5 BASIC15.31■□□□□ 0.04
NECTIN3Q9NQS3 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC15.31■□□□□ 0.04
NECTIN3Q9NQS3 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC15.31■□□□□ 0.04
NECTIN3Q9NQS3 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC15.31■□□□□ 0.04
NECTIN3Q9NQS3 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 173.1 ms