Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 PON3-203ENST00000427422 894 ntTSL 3 BASIC17.76■□□□□ 0.43
CCSER1Q9C0I3 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC17.76■□□□□ 0.43
CCSER1Q9C0I3 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCSER1Q9C0I3 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC17.76■□□□□ 0.43
CCSER1Q9C0I3 SERBP1P3-201ENST00000459980 809 ntBASIC17.76■□□□□ 0.43
CCSER1Q9C0I3 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC17.76■□□□□ 0.43
CCSER1Q9C0I3 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC17.76■□□□□ 0.43
CCSER1Q9C0I3 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC17.76■□□□□ 0.43
CCSER1Q9C0I3 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC17.76■□□□□ 0.43
CCSER1Q9C0I3 LSM12-202ENST00000585388 942 ntTSL 3 BASIC17.76■□□□□ 0.43
CCSER1Q9C0I3 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCSER1Q9C0I3 AL138828.2-201ENST00000615812 383 ntBASIC17.76■□□□□ 0.43
CCSER1Q9C0I3 HADH-212ENST00000638621 741 ntTSL 5 BASIC17.76■□□□□ 0.43
CCSER1Q9C0I3 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CCSER1Q9C0I3 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCSER1Q9C0I3 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCSER1Q9C0I3 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
CCSER1Q9C0I3 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CCSER1Q9C0I3 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC17.76■□□□□ 0.43
CCSER1Q9C0I3 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCSER1Q9C0I3 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCSER1Q9C0I3 BID-213ENST00000615414 2236 ntTSL 5 BASIC17.76■□□□□ 0.43
CCSER1Q9C0I3 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC17.76■□□□□ 0.43
CCSER1Q9C0I3 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCSER1Q9C0I3 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC17.76■□□□□ 0.43
CCSER1Q9C0I3 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
CCSER1Q9C0I3 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CCSER1Q9C0I3 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCSER1Q9C0I3 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCSER1Q9C0I3 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCSER1Q9C0I3 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CCSER1Q9C0I3 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CCSER1Q9C0I3 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC17.76■□□□□ 0.43
CCSER1Q9C0I3 API5-202ENST00000420461 2009 ntTSL 2 BASIC17.76■□□□□ 0.43
CCSER1Q9C0I3 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCSER1Q9C0I3 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC17.75■□□□□ 0.43
CCSER1Q9C0I3 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CCSER1Q9C0I3 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CCSER1Q9C0I3 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCSER1Q9C0I3 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC17.75■□□□□ 0.43
CCSER1Q9C0I3 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC17.75■□□□□ 0.43
CCSER1Q9C0I3 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCSER1Q9C0I3 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC17.75■□□□□ 0.43
CCSER1Q9C0I3 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCSER1Q9C0I3 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCSER1Q9C0I3 AC112693.3-201ENST00000624819 1983 ntBASIC17.75■□□□□ 0.43
CCSER1Q9C0I3 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
CCSER1Q9C0I3 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC17.75■□□□□ 0.43
CCSER1Q9C0I3 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCSER1Q9C0I3 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC17.75■□□□□ 0.43
CCSER1Q9C0I3 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCSER1Q9C0I3 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC17.75■□□□□ 0.43
CCSER1Q9C0I3 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC17.75■□□□□ 0.43
CCSER1Q9C0I3 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCSER1Q9C0I3 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC17.75■□□□□ 0.43
CCSER1Q9C0I3 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
CCSER1Q9C0I3 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCSER1Q9C0I3 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCSER1Q9C0I3 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCSER1Q9C0I3 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCSER1Q9C0I3 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
CCSER1Q9C0I3 KLF2P3-201ENST00000451977 1087 ntBASIC17.75■□□□□ 0.43
CCSER1Q9C0I3 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC17.75■□□□□ 0.43
CCSER1Q9C0I3 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC17.75■□□□□ 0.43
CCSER1Q9C0I3 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC17.75■□□□□ 0.43
CCSER1Q9C0I3 RPL28-205ENST00000558131 444 ntTSL 5 BASIC17.75■□□□□ 0.43
CCSER1Q9C0I3 AC140878.1-201ENST00000565277 250 ntBASIC17.75■□□□□ 0.43
CCSER1Q9C0I3 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC17.75■□□□□ 0.43
CCSER1Q9C0I3 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC17.75■□□□□ 0.43
CCSER1Q9C0I3 AC025048.3-201ENST00000590609 569 ntBASIC17.75■□□□□ 0.43
CCSER1Q9C0I3 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC17.75■□□□□ 0.43
CCSER1Q9C0I3 AC005702.4-201ENST00000618393 416 ntBASIC17.75■□□□□ 0.43
CCSER1Q9C0I3 AC073592.8-201ENST00000624126 511 ntBASIC17.75■□□□□ 0.43
CCSER1Q9C0I3 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC17.75■□□□□ 0.43
CCSER1Q9C0I3 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCSER1Q9C0I3 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC17.75■□□□□ 0.43
CCSER1Q9C0I3 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCSER1Q9C0I3 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCSER1Q9C0I3 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC17.75■□□□□ 0.43
CCSER1Q9C0I3 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CCSER1Q9C0I3 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
CCSER1Q9C0I3 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCSER1Q9C0I3 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
CCSER1Q9C0I3 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCSER1Q9C0I3 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCSER1Q9C0I3 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCSER1Q9C0I3 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCSER1Q9C0I3 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCSER1Q9C0I3 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCSER1Q9C0I3 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC17.75■□□□□ 0.43
CCSER1Q9C0I3 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCSER1Q9C0I3 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCSER1Q9C0I3 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCSER1Q9C0I3 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCSER1Q9C0I3 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCSER1Q9C0I3 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC17.74■□□□□ 0.43
CCSER1Q9C0I3 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC17.74■□□□□ 0.43
CCSER1Q9C0I3 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCSER1Q9C0I3 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC17.74■□□□□ 0.43
CCSER1Q9C0I3 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms