Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 SRD5A1-201ENST00000274192 7132 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 AC013726.1-201ENST00000563747 2285 ntBASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 AC243964.3-201ENST00000623022 2028 ntBASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 CCDC18-203ENST00000401026 4552 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
LCE3DQ9BYE3 ACVR2A-201ENST00000241416 5728 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
LCE3DQ9BYE3 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC4.32□□□□□ -1.72
LCE3DQ9BYE3 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC4.32□□□□□ -1.72
LCE3DQ9BYE3 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC4.32□□□□□ -1.72
LCE3DQ9BYE3 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
LCE3DQ9BYE3 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC4.32□□□□□ -1.72
LCE3DQ9BYE3 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
LCE3DQ9BYE3 PCDHA5-203ENST00000614258 4248 ntBASIC4.32□□□□□ -1.72
LCE3DQ9BYE3 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
LCE3DQ9BYE3 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
LCE3DQ9BYE3 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
LCE3DQ9BYE3 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC4.32□□□□□ -1.72
LCE3DQ9BYE3 USO1-201ENST00000264904 4135 ntTSL 2 BASIC4.32□□□□□ -1.72
LCE3DQ9BYE3 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
LCE3DQ9BYE3 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
LCE3DQ9BYE3 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
LCE3DQ9BYE3 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
LCE3DQ9BYE3 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC4.32□□□□□ -1.72
LCE3DQ9BYE3 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
LCE3DQ9BYE3 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
LCE3DQ9BYE3 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
LCE3DQ9BYE3 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC4.32□□□□□ -1.72
LCE3DQ9BYE3 ROBO1-212ENST00000618833 7492 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
LCE3DQ9BYE3 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
LCE3DQ9BYE3 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
LCE3DQ9BYE3 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
LCE3DQ9BYE3 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC4.32□□□□□ -1.72
LCE3DQ9BYE3 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC4.32□□□□□ -1.72
LCE3DQ9BYE3 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC4.32□□□□□ -1.72
LCE3DQ9BYE3 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC4.32□□□□□ -1.72
LCE3DQ9BYE3 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC4.32□□□□□ -1.72
LCE3DQ9BYE3 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC4.32□□□□□ -1.72
LCE3DQ9BYE3 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC4.32□□□□□ -1.72
LCE3DQ9BYE3 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
LCE3DQ9BYE3 MTMR3-201ENST00000323630 5866 ntTSL 5 BASIC4.32□□□□□ -1.72
LCE3DQ9BYE3 MRVI1-202ENST00000424001 5815 ntTSL 5 BASIC4.32□□□□□ -1.72
LCE3DQ9BYE3 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
LCE3DQ9BYE3 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC4.32□□□□□ -1.72
LCE3DQ9BYE3 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
LCE3DQ9BYE3 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC4.32□□□□□ -1.72
LCE3DQ9BYE3 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC4.32□□□□□ -1.72
LCE3DQ9BYE3 MARS-233ENST00000628866 2583 ntTSL 5 BASIC4.32□□□□□ -1.72
LCE3DQ9BYE3 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
LCE3DQ9BYE3 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC4.32□□□□□ -1.72
LCE3DQ9BYE3 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
LCE3DQ9BYE3 AL592424.1-201ENST00000563624 1536 ntBASIC4.32□□□□□ -1.72
LCE3DQ9BYE3 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
LCE3DQ9BYE3 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
LCE3DQ9BYE3 LDLRAD4-201ENST00000359446 8486 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
LCE3DQ9BYE3 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
LCE3DQ9BYE3 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
LCE3DQ9BYE3 BANP-203ENST00000393207 2438 ntTSL 2 BASIC4.32□□□□□ -1.72
LCE3DQ9BYE3 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
LCE3DQ9BYE3 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
LCE3DQ9BYE3 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
LCE3DQ9BYE3 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
LCE3DQ9BYE3 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC4.32□□□□□ -1.72
LCE3DQ9BYE3 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC4.32□□□□□ -1.72
LCE3DQ9BYE3 AC243591.1-201ENST00000452967 1364 ntBASIC4.32□□□□□ -1.72
LCE3DQ9BYE3 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC4.32□□□□□ -1.72
LCE3DQ9BYE3 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC4.32□□□□□ -1.72
LCE3DQ9BYE3 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC4.32□□□□□ -1.72
LCE3DQ9BYE3 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
LCE3DQ9BYE3 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC4.32□□□□□ -1.72
LCE3DQ9BYE3 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
LCE3DQ9BYE3 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
LCE3DQ9BYE3 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC4.32□□□□□ -1.72
LCE3DQ9BYE3 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
LCE3DQ9BYE3 LINC01837-201ENST00000590021 1320 ntTSL 5 BASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms