Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 Z92544.3-201ENST00000624747 417 ntBASIC18.83■□□□□ 0.6
NEK1Q96PY6 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC18.83■□□□□ 0.6
NEK1Q96PY6 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC18.83■□□□□ 0.6
NEK1Q96PY6 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NEK1Q96PY6 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.6
NEK1Q96PY6 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
NEK1Q96PY6 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC18.83■□□□□ 0.6
NEK1Q96PY6 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NEK1Q96PY6 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
NEK1Q96PY6 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
NEK1Q96PY6 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC18.83■□□□□ 0.6
NEK1Q96PY6 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
NEK1Q96PY6 AC090616.6-203ENST00000579186 1945 ntBASIC18.82■□□□□ 0.6
NEK1Q96PY6 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
NEK1Q96PY6 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
NEK1Q96PY6 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC18.82■□□□□ 0.6
NEK1Q96PY6 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NEK1Q96PY6 HYMAI-201ENST00000635591 3347 ntBASIC18.82■□□□□ 0.6
NEK1Q96PY6 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NEK1Q96PY6 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
NEK1Q96PY6 AC136604.1-201ENST00000418535 575 ntBASIC18.82■□□□□ 0.6
NEK1Q96PY6 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC18.82■□□□□ 0.6
NEK1Q96PY6 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC18.82■□□□□ 0.6
NEK1Q96PY6 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
NEK1Q96PY6 AL589739.1-201ENST00000607720 493 ntBASIC18.82■□□□□ 0.6
NEK1Q96PY6 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC18.82■□□□□ 0.6
NEK1Q96PY6 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NEK1Q96PY6 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
NEK1Q96PY6 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
NEK1Q96PY6 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
NEK1Q96PY6 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC18.82■□□□□ 0.6
NEK1Q96PY6 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC18.82■□□□□ 0.6
NEK1Q96PY6 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
NEK1Q96PY6 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NEK1Q96PY6 AC022532.1-201ENST00000624563 1728 ntBASIC18.82■□□□□ 0.6
NEK1Q96PY6 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NEK1Q96PY6 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NEK1Q96PY6 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NEK1Q96PY6 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC18.82■□□□□ 0.6
NEK1Q96PY6 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC18.82■□□□□ 0.6
NEK1Q96PY6 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
NEK1Q96PY6 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NEK1Q96PY6 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NEK1Q96PY6 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NEK1Q96PY6 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC18.81■□□□□ 0.6
NEK1Q96PY6 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
NEK1Q96PY6 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NEK1Q96PY6 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
NEK1Q96PY6 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC18.81■□□□□ 0.6
NEK1Q96PY6 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC18.81■□□□□ 0.6
NEK1Q96PY6 AC009090.5-201ENST00000624886 2285 ntBASIC18.81■□□□□ 0.6
NEK1Q96PY6 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NEK1Q96PY6 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC18.81■□□□□ 0.6
NEK1Q96PY6 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC18.81■□□□□ 0.6
NEK1Q96PY6 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NEK1Q96PY6 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NEK1Q96PY6 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
NEK1Q96PY6 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NEK1Q96PY6 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NEK1Q96PY6 PPT1-215ENST00000641471 2368 ntBASIC18.81■□□□□ 0.6
NEK1Q96PY6 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC18.81■□□□□ 0.6
NEK1Q96PY6 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NEK1Q96PY6 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
NEK1Q96PY6 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NEK1Q96PY6 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NEK1Q96PY6 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NEK1Q96PY6 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NEK1Q96PY6 METTL21AP1-201ENST00000438852 635 ntBASIC18.81■□□□□ 0.6
NEK1Q96PY6 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NEK1Q96PY6 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NEK1Q96PY6 NME4-207ENST00000450036 985 ntTSL 3 BASIC18.81■□□□□ 0.6
NEK1Q96PY6 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC18.81■□□□□ 0.6
NEK1Q96PY6 AC004449.1-201ENST00000564240 433 ntBASIC18.81■□□□□ 0.6
NEK1Q96PY6 GPER1-207ENST00000619052 571 ntTSL 2 BASIC18.81■□□□□ 0.6
NEK1Q96PY6 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NEK1Q96PY6 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC18.81■□□□□ 0.6
NEK1Q96PY6 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NEK1Q96PY6 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NEK1Q96PY6 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
NEK1Q96PY6 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NEK1Q96PY6 AC126177.1-201ENST00000547829 2218 ntBASIC18.81■□□□□ 0.6
NEK1Q96PY6 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NEK1Q96PY6 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NEK1Q96PY6 ING5-213ENST00000636051 4199 ntTSL 5 BASIC18.81■□□□□ 0.6
NEK1Q96PY6 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
NEK1Q96PY6 CETN4P-206ENST00000642099 2168 ntBASIC18.81■□□□□ 0.6
NEK1Q96PY6 AL607033.1-201ENST00000623900 1599 ntBASIC18.81■□□□□ 0.6
NEK1Q96PY6 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NEK1Q96PY6 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC18.8■□□□□ 0.6
NEK1Q96PY6 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NEK1Q96PY6 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NEK1Q96PY6 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC18.8■□□□□ 0.6
NEK1Q96PY6 TUBB3P1-201ENST00000405796 1332 ntBASIC18.8■□□□□ 0.6
NEK1Q96PY6 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
NEK1Q96PY6 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
NEK1Q96PY6 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NEK1Q96PY6 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
NEK1Q96PY6 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
NEK1Q96PY6 AC013268.4-201ENST00000637413 2228 ntBASIC18.8■□□□□ 0.6
NEK1Q96PY6 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms