Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC18.5■□□□□ 0.55
CHAMP1Q96JM3 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CHAMP1Q96JM3 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CHAMP1Q96JM3 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
CHAMP1Q96JM3 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC18.5■□□□□ 0.55
CHAMP1Q96JM3 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CHAMP1Q96JM3 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CHAMP1Q96JM3 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CHAMP1Q96JM3 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CHAMP1Q96JM3 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHAMP1Q96JM3 BCAR1-209ENST00000546196 1340 ntBASIC18.49■□□□□ 0.55
CHAMP1Q96JM3 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHAMP1Q96JM3 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CHAMP1Q96JM3 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CHAMP1Q96JM3 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC18.49■□□□□ 0.55
CHAMP1Q96JM3 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CHAMP1Q96JM3 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC18.49■□□□□ 0.55
CHAMP1Q96JM3 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CHAMP1Q96JM3 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHAMP1Q96JM3 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CHAMP1Q96JM3 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHAMP1Q96JM3 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC18.49■□□□□ 0.55
CHAMP1Q96JM3 PRYP6-201ENST00000514804 343 ntBASIC18.49■□□□□ 0.55
CHAMP1Q96JM3 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CHAMP1Q96JM3 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHAMP1Q96JM3 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHAMP1Q96JM3 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHAMP1Q96JM3 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC18.49■□□□□ 0.55
CHAMP1Q96JM3 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CHAMP1Q96JM3 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHAMP1Q96JM3 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CHAMP1Q96JM3 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC18.49■□□□□ 0.55
CHAMP1Q96JM3 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC18.49■□□□□ 0.55
CHAMP1Q96JM3 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC18.49■□□□□ 0.55
CHAMP1Q96JM3 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CHAMP1Q96JM3 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC18.49■□□□□ 0.55
CHAMP1Q96JM3 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC18.49■□□□□ 0.55
CHAMP1Q96JM3 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CHAMP1Q96JM3 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHAMP1Q96JM3 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC18.48■□□□□ 0.55
CHAMP1Q96JM3 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
CHAMP1Q96JM3 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHAMP1Q96JM3 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CHAMP1Q96JM3 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
CHAMP1Q96JM3 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
CHAMP1Q96JM3 KRT8P44-201ENST00000441609 1350 ntBASIC18.48■□□□□ 0.55
CHAMP1Q96JM3 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHAMP1Q96JM3 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHAMP1Q96JM3 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC18.48■□□□□ 0.55
CHAMP1Q96JM3 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHAMP1Q96JM3 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC18.48■□□□□ 0.55
CHAMP1Q96JM3 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHAMP1Q96JM3 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHAMP1Q96JM3 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CHAMP1Q96JM3 AC245100.5-201ENST00000452108 331 ntBASIC18.48■□□□□ 0.55
CHAMP1Q96JM3 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHAMP1Q96JM3 PPIE-208ENST00000470213 927 ntTSL 3 BASIC18.48■□□□□ 0.55
CHAMP1Q96JM3 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC18.48■□□□□ 0.55
CHAMP1Q96JM3 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC18.48■□□□□ 0.55
CHAMP1Q96JM3 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC18.48■□□□□ 0.55
CHAMP1Q96JM3 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC18.48■□□□□ 0.55
CHAMP1Q96JM3 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHAMP1Q96JM3 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHAMP1Q96JM3 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC18.48■□□□□ 0.55
CHAMP1Q96JM3 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CHAMP1Q96JM3 AL136982.4-201ENST00000437689 1740 ntBASIC18.48■□□□□ 0.55
CHAMP1Q96JM3 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CHAMP1Q96JM3 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHAMP1Q96JM3 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CHAMP1Q96JM3 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CHAMP1Q96JM3 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CHAMP1Q96JM3 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHAMP1Q96JM3 AC007191.1-201ENST00000623179 2995 ntBASIC18.48■□□□□ 0.55
CHAMP1Q96JM3 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHAMP1Q96JM3 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CHAMP1Q96JM3 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHAMP1Q96JM3 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC18.47■□□□□ 0.55
CHAMP1Q96JM3 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHAMP1Q96JM3 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHAMP1Q96JM3 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
CHAMP1Q96JM3 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
CHAMP1Q96JM3 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHAMP1Q96JM3 AP001282.1-201ENST00000531301 1499 ntBASIC18.47■□□□□ 0.55
CHAMP1Q96JM3 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC18.47■□□□□ 0.55
CHAMP1Q96JM3 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC18.47■□□□□ 0.55
CHAMP1Q96JM3 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHAMP1Q96JM3 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
CHAMP1Q96JM3 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHAMP1Q96JM3 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC18.47■□□□□ 0.55
CHAMP1Q96JM3 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
CHAMP1Q96JM3 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CHAMP1Q96JM3 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC18.47■□□□□ 0.55
CHAMP1Q96JM3 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC18.47■□□□□ 0.55
CHAMP1Q96JM3 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
CHAMP1Q96JM3 AC007967.2-201ENST00000432613 625 ntBASIC18.47■□□□□ 0.55
CHAMP1Q96JM3 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC18.47■□□□□ 0.55
CHAMP1Q96JM3 KRT18P58-201ENST00000527480 1120 ntBASIC18.47■□□□□ 0.55
CHAMP1Q96JM3 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC18.47■□□□□ 0.55
CHAMP1Q96JM3 KRT19P2-202ENST00000557173 1012 ntBASIC18.47■□□□□ 0.55
CHAMP1Q96JM3 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms