Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CHMP6Q96FZ7 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
CHMP6Q96FZ7 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CHMP6Q96FZ7 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
CHMP6Q96FZ7 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CHMP6Q96FZ7 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CHMP6Q96FZ7 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CHMP6Q96FZ7 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC16.12■□□□□ 0.17
CHMP6Q96FZ7 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
CHMP6Q96FZ7 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CHMP6Q96FZ7 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CHMP6Q96FZ7 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
CHMP6Q96FZ7 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CHMP6Q96FZ7 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CHMP6Q96FZ7 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHMP6Q96FZ7 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC16.11■□□□□ 0.17
CHMP6Q96FZ7 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC16.11■□□□□ 0.17
CHMP6Q96FZ7 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHMP6Q96FZ7 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHMP6Q96FZ7 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHMP6Q96FZ7 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHMP6Q96FZ7 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHMP6Q96FZ7 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CHMP6Q96FZ7 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC16.11■□□□□ 0.17
CHMP6Q96FZ7 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHMP6Q96FZ7 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHMP6Q96FZ7 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHMP6Q96FZ7 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHMP6Q96FZ7 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHMP6Q96FZ7 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHMP6Q96FZ7 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC16.11■□□□□ 0.17
CHMP6Q96FZ7 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CHMP6Q96FZ7 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
CHMP6Q96FZ7 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHMP6Q96FZ7 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC16.11■□□□□ 0.17
CHMP6Q96FZ7 FICD-205ENST00000552758 603 ntTSL 2 BASIC16.11■□□□□ 0.17
CHMP6Q96FZ7 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
CHMP6Q96FZ7 PRELID1P1-202ENST00000567272 903 ntBASIC16.11■□□□□ 0.17
CHMP6Q96FZ7 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC16.11■□□□□ 0.17
CHMP6Q96FZ7 AP001350.2-201ENST00000625104 1094 ntBASIC16.11■□□□□ 0.17
CHMP6Q96FZ7 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC16.11■□□□□ 0.17
CHMP6Q96FZ7 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC16.11■□□□□ 0.17
CHMP6Q96FZ7 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC16.11■□□□□ 0.17
CHMP6Q96FZ7 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CHMP6Q96FZ7 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CHMP6Q96FZ7 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHMP6Q96FZ7 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHMP6Q96FZ7 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHMP6Q96FZ7 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC16.11■□□□□ 0.17
CHMP6Q96FZ7 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHMP6Q96FZ7 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC16.11■□□□□ 0.17
CHMP6Q96FZ7 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC16.11■□□□□ 0.17
CHMP6Q96FZ7 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CHMP6Q96FZ7 NCF1C-201ENST00000438382 1427 ntBASIC16.11■□□□□ 0.17
CHMP6Q96FZ7 OS9-204ENST00000389146 2091 ntTSL 2 BASIC16.1■□□□□ 0.17
CHMP6Q96FZ7 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHMP6Q96FZ7 AC148477.4-201ENST00000613430 1793 ntBASIC16.1■□□□□ 0.17
CHMP6Q96FZ7 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
CHMP6Q96FZ7 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHMP6Q96FZ7 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHMP6Q96FZ7 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
CHMP6Q96FZ7 CNTNAP3P2-201ENST00000617175 3861 ntBASIC16.1■□□□□ 0.17
CHMP6Q96FZ7 AC117489.1-201ENST00000625169 3217 ntBASIC16.1■□□□□ 0.17
CHMP6Q96FZ7 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC16.1■□□□□ 0.17
CHMP6Q96FZ7 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHMP6Q96FZ7 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHMP6Q96FZ7 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CHMP6Q96FZ7 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHMP6Q96FZ7 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHMP6Q96FZ7 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC16.1■□□□□ 0.17
CHMP6Q96FZ7 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CHMP6Q96FZ7 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CHMP6Q96FZ7 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
CHMP6Q96FZ7 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC16.1■□□□□ 0.17
CHMP6Q96FZ7 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHMP6Q96FZ7 CDK2AP2P3-201ENST00000422476 372 ntBASIC16.1■□□□□ 0.17
CHMP6Q96FZ7 ABCD1P5-201ENST00000445663 754 ntBASIC16.1■□□□□ 0.17
CHMP6Q96FZ7 KRT16P4-201ENST00000453883 522 ntBASIC16.1■□□□□ 0.17
CHMP6Q96FZ7 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
CHMP6Q96FZ7 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC16.1■□□□□ 0.17
CHMP6Q96FZ7 AC087641.1-201ENST00000557561 1021 ntBASIC16.1■□□□□ 0.17
CHMP6Q96FZ7 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC16.1■□□□□ 0.17
CHMP6Q96FZ7 AL732292.2-201ENST00000609649 430 ntBASIC16.1■□□□□ 0.17
CHMP6Q96FZ7 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC16.1■□□□□ 0.17
CHMP6Q96FZ7 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CHMP6Q96FZ7 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
CHMP6Q96FZ7 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHMP6Q96FZ7 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CHMP6Q96FZ7 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC16.1■□□□□ 0.17
CHMP6Q96FZ7 ABR-228ENST00000574437 3196 ntTSL 5 BASIC16.1■□□□□ 0.17
CHMP6Q96FZ7 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CHMP6Q96FZ7 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CHMP6Q96FZ7 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC16.1■□□□□ 0.17
CHMP6Q96FZ7 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
CHMP6Q96FZ7 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CHMP6Q96FZ7 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CHMP6Q96FZ7 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHMP6Q96FZ7 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
CHMP6Q96FZ7 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHMP6Q96FZ7 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms