Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
AP3S1Q92572 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
AP3S1Q92572 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
AP3S1Q92572 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
AP3S1Q92572 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
AP3S1Q92572 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
AP3S1Q92572 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
AP3S1Q92572 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC14.09□□□□□ -0.15
AP3S1Q92572 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
AP3S1Q92572 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
AP3S1Q92572 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC14.09□□□□□ -0.15
AP3S1Q92572 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
AP3S1Q92572 KRT18P38-201ENST00000449496 1282 ntBASIC14.09□□□□□ -0.15
AP3S1Q92572 EHF-205ENST00000527935 557 ntTSL 2 BASIC14.09□□□□□ -0.15
AP3S1Q92572 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC14.09□□□□□ -0.15
AP3S1Q92572 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC14.09□□□□□ -0.15
AP3S1Q92572 LINC01023-201ENST00000606054 436 ntBASIC14.09□□□□□ -0.15
AP3S1Q92572 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
AP3S1Q92572 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC14.09□□□□□ -0.15
AP3S1Q92572 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC14.09□□□□□ -0.15
AP3S1Q92572 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
AP3S1Q92572 AP001282.1-201ENST00000531301 1499 ntBASIC14.09□□□□□ -0.15
AP3S1Q92572 AC005840.4-201ENST00000541242 2494 ntBASIC14.09□□□□□ -0.15
AP3S1Q92572 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC14.09□□□□□ -0.15
AP3S1Q92572 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
AP3S1Q92572 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
AP3S1Q92572 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
AP3S1Q92572 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
AP3S1Q92572 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
AP3S1Q92572 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
AP3S1Q92572 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
AP3S1Q92572 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC14.09□□□□□ -0.15
AP3S1Q92572 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
AP3S1Q92572 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC14.09□□□□□ -0.15
AP3S1Q92572 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
AP3S1Q92572 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
AP3S1Q92572 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
AP3S1Q92572 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
AP3S1Q92572 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
AP3S1Q92572 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC14.09□□□□□ -0.15
AP3S1Q92572 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC14.09□□□□□ -0.15
AP3S1Q92572 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
AP3S1Q92572 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC14.09□□□□□ -0.15
AP3S1Q92572 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
AP3S1Q92572 AC041040.2-201ENST00000622926 2899 ntBASIC14.08□□□□□ -0.15
AP3S1Q92572 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
AP3S1Q92572 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
AP3S1Q92572 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
AP3S1Q92572 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC14.08□□□□□ -0.15
AP3S1Q92572 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.15
AP3S1Q92572 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
AP3S1Q92572 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC14.08□□□□□ -0.16
AP3S1Q92572 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC14.08□□□□□ -0.16
AP3S1Q92572 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
AP3S1Q92572 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC14.08□□□□□ -0.16
AP3S1Q92572 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC14.08□□□□□ -0.16
AP3S1Q92572 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
AP3S1Q92572 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
AP3S1Q92572 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
AP3S1Q92572 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
AP3S1Q92572 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
AP3S1Q92572 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
AP3S1Q92572 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
AP3S1Q92572 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC14.08□□□□□ -0.16
AP3S1Q92572 BSG-214ENST00000614867 960 ntTSL 3 BASIC14.08□□□□□ -0.16
AP3S1Q92572 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
AP3S1Q92572 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC14.08□□□□□ -0.16
AP3S1Q92572 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC14.08□□□□□ -0.16
AP3S1Q92572 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
AP3S1Q92572 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
AP3S1Q92572 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
AP3S1Q92572 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
AP3S1Q92572 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC14.08□□□□□ -0.16
AP3S1Q92572 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
AP3S1Q92572 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
AP3S1Q92572 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
AP3S1Q92572 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
AP3S1Q92572 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC14.08□□□□□ -0.16
AP3S1Q92572 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC14.08□□□□□ -0.16
AP3S1Q92572 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
AP3S1Q92572 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC14.08□□□□□ -0.16
AP3S1Q92572 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
AP3S1Q92572 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
AP3S1Q92572 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
AP3S1Q92572 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC14.08□□□□□ -0.16
AP3S1Q92572 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
AP3S1Q92572 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
AP3S1Q92572 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
AP3S1Q92572 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
AP3S1Q92572 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
AP3S1Q92572 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
AP3S1Q92572 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
AP3S1Q92572 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
AP3S1Q92572 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC14.07□□□□□ -0.16
AP3S1Q92572 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
AP3S1Q92572 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
AP3S1Q92572 WASH6P-202ENST00000359512 1437 ntBASIC14.07□□□□□ -0.16
AP3S1Q92572 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
AP3S1Q92572 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC14.07□□□□□ -0.16
AP3S1Q92572 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms