Protein–RNA interactions for Protein: Q8WUX9

CHMP7, Charged multivesicular body protein 7, humanhuman

Predicted RBP Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP7Q8WUX9 RPS15-208ENST00000591804 711 ntTSL 5 BASIC25.29■■□□□ 1.64
CHMP7Q8WUX9 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC25.29■■□□□ 1.64
CHMP7Q8WUX9 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC25.29■■□□□ 1.64
CHMP7Q8WUX9 GPR39-203ENST00000622084 900 ntTSL 5 BASIC25.29■■□□□ 1.64
CHMP7Q8WUX9 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
CHMP7Q8WUX9 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC25.29■■□□□ 1.64
CHMP7Q8WUX9 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
CHMP7Q8WUX9 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC25.29■■□□□ 1.64
CHMP7Q8WUX9 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
CHMP7Q8WUX9 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC25.29■■□□□ 1.64
CHMP7Q8WUX9 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
CHMP7Q8WUX9 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
CHMP7Q8WUX9 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC25.28■■□□□ 1.64
CHMP7Q8WUX9 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
CHMP7Q8WUX9 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
CHMP7Q8WUX9 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC25.28■■□□□ 1.64
CHMP7Q8WUX9 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
CHMP7Q8WUX9 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC25.28■■□□□ 1.64
CHMP7Q8WUX9 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC25.28■■□□□ 1.64
CHMP7Q8WUX9 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC25.28■■□□□ 1.64
CHMP7Q8WUX9 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
CHMP7Q8WUX9 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC25.28■■□□□ 1.64
CHMP7Q8WUX9 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
CHMP7Q8WUX9 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
CHMP7Q8WUX9 AC104073.2-201ENST00000453737 312 ntBASIC25.28■■□□□ 1.64
CHMP7Q8WUX9 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
CHMP7Q8WUX9 MARK2P5-201ENST00000507649 634 ntBASIC25.28■■□□□ 1.64
CHMP7Q8WUX9 IGLV3-15-201ENST00000518356 244 ntBASIC25.28■■□□□ 1.64
CHMP7Q8WUX9 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
CHMP7Q8WUX9 WT1-AS_6.1-201ENST00000614919 121 ntBASIC25.28■■□□□ 1.64
CHMP7Q8WUX9 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
CHMP7Q8WUX9 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC25.28■■□□□ 1.64
CHMP7Q8WUX9 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC25.28■■□□□ 1.64
CHMP7Q8WUX9 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
CHMP7Q8WUX9 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
CHMP7Q8WUX9 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC25.28■■□□□ 1.64
CHMP7Q8WUX9 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC25.28■■□□□ 1.64
CHMP7Q8WUX9 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
CHMP7Q8WUX9 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC25.28■■□□□ 1.64
CHMP7Q8WUX9 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
CHMP7Q8WUX9 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
CHMP7Q8WUX9 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
CHMP7Q8WUX9 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC25.28■■□□□ 1.64
CHMP7Q8WUX9 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC25.27■■□□□ 1.64
CHMP7Q8WUX9 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
CHMP7Q8WUX9 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC25.27■■□□□ 1.64
CHMP7Q8WUX9 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC25.27■■□□□ 1.64
CHMP7Q8WUX9 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
CHMP7Q8WUX9 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
CHMP7Q8WUX9 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC25.27■■□□□ 1.64
CHMP7Q8WUX9 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
CHMP7Q8WUX9 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
CHMP7Q8WUX9 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
CHMP7Q8WUX9 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC25.27■■□□□ 1.64
CHMP7Q8WUX9 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
CHMP7Q8WUX9 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC25.27■■□□□ 1.64
CHMP7Q8WUX9 PDIA3P2-201ENST00000428073 158 ntBASIC25.27■■□□□ 1.64
CHMP7Q8WUX9 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC25.27■■□□□ 1.64
CHMP7Q8WUX9 AL353637.1-201ENST00000451571 732 ntBASIC25.27■■□□□ 1.64
CHMP7Q8WUX9 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
CHMP7Q8WUX9 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC25.27■■□□□ 1.64
CHMP7Q8WUX9 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC25.27■■□□□ 1.64
CHMP7Q8WUX9 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC25.27■■□□□ 1.64
CHMP7Q8WUX9 RN7SL163P-201ENST00000583100 276 ntBASIC25.27■■□□□ 1.64
CHMP7Q8WUX9 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC25.27■■□□□ 1.64
CHMP7Q8WUX9 AC087045.2-201ENST00000606279 1003 ntBASIC25.27■■□□□ 1.64
CHMP7Q8WUX9 CDK7-214ENST00000626796 358 ntTSL 5 BASIC25.27■■□□□ 1.64
CHMP7Q8WUX9 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC25.27■■□□□ 1.64
CHMP7Q8WUX9 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC25.27■■□□□ 1.64
CHMP7Q8WUX9 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC25.27■■□□□ 1.64
CHMP7Q8WUX9 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC25.27■■□□□ 1.64
CHMP7Q8WUX9 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
CHMP7Q8WUX9 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
CHMP7Q8WUX9 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
CHMP7Q8WUX9 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
CHMP7Q8WUX9 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC25.27■■□□□ 1.64
CHMP7Q8WUX9 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
CHMP7Q8WUX9 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC25.26■■□□□ 1.63
CHMP7Q8WUX9 AL157791.1-201ENST00000553667 1699 ntBASIC25.26■■□□□ 1.63
CHMP7Q8WUX9 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC25.26■■□□□ 1.63
CHMP7Q8WUX9 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
CHMP7Q8WUX9 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC25.26■■□□□ 1.63
CHMP7Q8WUX9 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
CHMP7Q8WUX9 AC141586.5-201ENST00000624546 2050 ntBASIC25.26■■□□□ 1.63
CHMP7Q8WUX9 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC25.26■■□□□ 1.63
CHMP7Q8WUX9 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
CHMP7Q8WUX9 POM121L8P-201ENST00000417732 1281 ntBASIC25.26■■□□□ 1.63
CHMP7Q8WUX9 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC25.26■■□□□ 1.63
CHMP7Q8WUX9 POM121L9P-203ENST00000441984 1285 ntBASIC25.26■■□□□ 1.63
CHMP7Q8WUX9 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
CHMP7Q8WUX9 RTN3P1-201ENST00000536295 711 ntBASIC25.26■■□□□ 1.63
CHMP7Q8WUX9 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC25.26■■□□□ 1.63
CHMP7Q8WUX9 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC25.26■■□□□ 1.63
CHMP7Q8WUX9 AC009084.3-201ENST00000623356 437 ntBASIC25.26■■□□□ 1.63
CHMP7Q8WUX9 AL805961.1-201ENST00000642026 753 ntBASIC25.26■■□□□ 1.63
CHMP7Q8WUX9 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
CHMP7Q8WUX9 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC25.26■■□□□ 1.63
CHMP7Q8WUX9 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC25.26■■□□□ 1.63
CHMP7Q8WUX9 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC25.26■■□□□ 1.63
CHMP7Q8WUX9 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC25.26■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms